Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01377 ATGGGGAGAGCTACAAATTCATCTTCTTCATCAATTGATAGCAGCAACCATCCTTCTACCTCATCTGCAACTTCTCCTCCTCAACAAAAGAGAGACTTGATCACAGATCTAAGGCTTGGACTCAGCATTTCAACCTCTCAATATGACAATACTTCAAATTCAAGGGAGCCACCATCGGATTGGCCACCGATCAAACCACTCCTAAGGAGTACACTCGCGGAGAGAGGAAACCGGCATCGGCCTACCTTCTTTGTCAAGGTTTACATGGAAGGAGTTCCAATTGGCAGGAAACTGGATTTGTTCGCCCATGACGATTATGATGGTCTAATAAGGACTCTTGGCCATATGTTCAAGACCACCATTTTCTGCCCCGGTATCGATCGAGTGCATTCCGATAAAGATAATGTGTTAACTTATGAAGACAAGGAAGGGGATTGGATGATGGTGGGGGATGTTCCTTGGGAGATGTTCTTGACCACTGTGAAGAGACTTAAGATCACAAGGGCAGAGAAGTGCTAG 519 0.4547 MGRATNSSSSSIDSSNHPSTSSATSPPQQKRDLITDLRLGLSISTSQYDNTSNSREPPSDWPPIKPLLRSTLAERGNRHRPTFFVKVYMEGVPIGRKLDLFAHDDYDGLIRTLGHMFKTTIFCPGIDRVHSDKDNVLTYEDKEGDWMMVGDVPWEMFLTTVKRLKITRAEKC* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01377 172 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 34 170 IPR003311 GO:0005634|GO:0006355
Eupl12g01377 172 MobiDBLite consensus disorder prediction 1 31 - -
Eupl12g01377 172 Gene3D - 77 172 - -
Eupl12g01377 172 MobiDBLite consensus disorder prediction 39 58 - -
Eupl12g01377 172 ProSiteProfiles PB1 domain profile. 82 171 IPR000270 GO:0005515
Eupl12g01377 172 SUPERFAMILY CAD & PB1 domains 78 166 - -
Eupl12g01377 172 MobiDBLite consensus disorder prediction 1 66 - -
Eupl12g01377 172 Pfam AUX/IAA family 48 168 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01377 Eupl-Chr12 30354471 30355648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01377 48 166 B3 DNA Binding Superfamily AT3G61830 29.457 2.03e-11 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Eupl12g01377 AUX_IAA 3.2e-30 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01377 K14484 - nnu:104607191 248.825