Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01375 ATGCCGAGCCCAGGGACAATGAGATGCGTAGACATCATCTTGGCAATAATACTTCCTCCTCTTGGAGTTTTTCTCAAGTTCGGATGCAAGGTCCAGTTCTGGATCTGTCTTTTGCTCACGATTTTAGGGTACATTCCTGGAATCATTTACGCCATCTACATCATCACCAAGTGA 174 0.4483 MPSPGTMRCVDIILAIILPPLGVFLKFGCKVQFWICLLLTILGYIPGIIYAIYIITK* 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01375 57 ProSitePatterns Uncharacterized protein family UPF0057 signature. 13 28 IPR000612 GO:0016020
Eupl12g01375 57 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 7 57 IPR000612 GO:0016020
Eupl12g01375 57 Pfam Proteolipid membrane potential modulator 9 55 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01375 Eupl-Chr12 30346833 30347473 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01375 5 57 RCI2 Gene Family AT3G05890 77.358 1.04e-24 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01375 - - pda:103696737 77.0257