Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01364 ATGCCATCGAACGAAGAAGAAGATCAGAACATGTACGAGGGAGAGGAAGAAGAAGACCTTGATGGAGAAGGAAGCGAAGAAGAAGACGAAGATGAAGAAGAAGAAGAATTAATAACACACAACCAACCCGAAGACGAAGAAGAGGAGGAAGAAGAAGAAGAAAATCTCAACTCCGACTCTCCTTCCACCTCATCTGACGACCCCAACAAATACTCTTCTACGCTCCCCGTGGGAACCCCTCCCACCACTACCACCGCCACCACCACCACCACAACCACCACCGTCGCTACCGCCATCGAAACACCACCTACCGTTACCGACCACAAACGTCAACGCACCATTGAACCAACAGAAGAGAAAAAGCCCTCCGCTTTCGATGATTCTCGGCGACTATTTCAACGTCTATGGACCGACGAGGACGAGATCGGACTCTTGCAAGGGTTTCTCGACTACACCACCCAGCGAGGATCGCAGAACTCATCTCACCACCACGACACCGCTCCGTTCTACGACCAGATCAAAACCCGGTTACAACTCGATTTCAACAAGAACCAGCTCGTTGAGAAGCTAAGACGATTAAAGAAGAAGTACCGGAACGTCGTCACACGGATTAGTTCTGGTAAAGAGTTCTCTTTTAAGAGCGCTCATGATCAGGCCACCTTTGAGATCTCTCGCAAGATCTGGAGCAGTTCTGTTACGGGCGGAGGGGGAGTCGAAGAAGCCGGAATTGAAGATGATGAAGTAAACCCTACGAATGGTGAAATTAACTATGGTGCTAATGTTAATAATTCGGGGAAGAAGGTTCCAAGGTCGCGGAAACGATCTCGAATTAGAGCAGCCGAGGATAATATATCGAATCCATCCACCTATCAGGTGAATTCGTCGATTCCAAATGTTATTGAAGATACGGTGAAAAGTTGCCTTTCGCCTCTGTTTAAGGAGCTGCTTTATTGCGCAATCAATGGACCCTGCAATTCGGGAGGGTTAGGAGGTGTGGCATTGGGAGGGTTAGGAGGTATGGCGTTGAATCCAGTACCATTGAATTTTGGGGGTAATTCTTTGATGAATTTCTCGAGGGGGGAGGTGATAGATGAGAAGTGGAGGAAGCAGCAGATTTTGGAATTGGAGGTCTATTCGAAGCGGATAGAGTTGGTGCAAGATCAGATAAAGTCAGCATTGGAGGAGCTGAGGTCGATGGATAGTTGA 1206 0.4809 MPSNEEEDQNMYEGEEEEDLDGEGSEEEDEDEEEEELITHNQPEDEEEEEEEEENLNSDSPSTSSDDPNKYSSTLPVGTPPTTTTATTTTTTTTVATAIETPPTVTDHKRQRTIEPTEEKKPSAFDDSRRLFQRLWTDEDEIGLLQGFLDYTTQRGSQNSSHHHDTAPFYDQIKTRLQLDFNKNQLVEKLRRLKKKYRNVVTRISSGKEFSFKSAHDQATFEISRKIWSSSVTGGGGVEEAGIEDDEVNPTNGEINYGANVNNSGKKVPRSRKRSRIRAAEDNISNPSTYQVNSSIPNVIEDTVKSCLSPLFKELLYCAINGPCNSGGLGGVALGGLGGMALNPVPLNFGGNSLMNFSRGEVIDEKWRKQQILELEVYSKRIELVQDQIKSALEELRSMDS* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01364 401 MobiDBLite consensus disorder prediction 105 125 - -
Eupl12g01364 401 Coils Coil 375 395 - -
Eupl12g01364 401 MobiDBLite consensus disorder prediction 58 101 - -
Eupl12g01364 401 Pfam Protein of unknown function, DUF573 132 229 IPR007592 GO:0006355
Eupl12g01364 401 PANTHER BNAANNG10740D PROTEIN-RELATED 27 395 IPR007592 GO:0006355
Eupl12g01364 401 MobiDBLite consensus disorder prediction 1 125 - -
Eupl12g01364 401 MobiDBLite consensus disorder prediction 241 273 - -
Eupl12g01364 401 MobiDBLite consensus disorder prediction 1 57 - -
Eupl12g01364 401 Coils Coil 183 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01364 Eupl-Chr12 30257642 30261890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01364 52 399 GeBP Transcription Factor Family AT5G28040 45.293 1.47e-86 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Eupl12g01364 DUF573 1.8e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01364 - - ming:122063707 429.098