Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01353 ATGGTTGGTGAGCACGGAACTCAGCTGTCTGGGGGGCAGAAACAAAGAGTTGCAATAGCTAGAGCTATTCTGAGAGATCCACGAATTTTGCTTCTAGACGAGGCAACAAGTGCACTCGATGCGGAGTCTGAACGGATTGTGCAGGAGGCATTAGACAGGATCATGATTAATCGAACAACCATCATTGTAGCCCATCGATTGAGTACGGTGAGGAATGCTAATGTGATTGCCTTGATTCATAAAGGAAAGATAGTTGAAAAAGGTTCACACTCAGAGCTACTCAATGATTCAAATGGGGCATACAGTCAACTTATACACTTGCAAGAAGTGAACCAAGAGGCATCCACAACTGACCAGGATAAGTCAGAAGGTTCACTGGATTCTCAAAGGAAATCGAACGAGTGTTTATCATTTGAAAGACCTTCAAGCCGCCAGTCATCCTCTGACTCATTAGGCCTACCTTCTGTAGTCGACATTGAAGAAACTGGCTCTACAGAACTGGACACCCCAACACCGTTGCAACGACCATATGAAGTCCCTCTTCGCCACCTTGCCTATCTCAACAAGCCAGAGCTCCCAGTGCTACTTCTTGGGGCCGTTGCTGCAGTTATCAACGGCTCTGTGCTCCCCATTTTTGGTGTACTCATTTCTAGTATGATTAAAACATTTTATGAGCCACCAGAGAAGCTCCGAAAGGATTCAAGGTTTTGGTGTTGGATGTTTGTCATGGCTGGCTTTATATCTTTCATGTCTTCCATTGGAAAATCATACTTCTTTGGCATAGCAGGCAACCAGTTAATAAGAAGGATTCGGTTGTTGTCATTTGAGAAGGTGGTGCACATGGAAATTGGATGGTTTGATGATGCCCAAAACTCTAGCAGCACGATAGGTGCGAGGCTGTCAATTGATGCCGCGACAATCCGTGGTCTGGTTGGAGATGCACTAGCTCTGATTGTTCAGAACTCTGCAGCAGTTATTGTGGGTTTGGTAATTGCTCTAGAAGCAAACTGGCAGTTGGCTTTAATAATTGTCTCTTTGCTACCTTTGTTAGCTGTCAATGGATGGGCCTATACGATGCTCATAAAAGGATTCAGTGCTAATGCAAAGATGATGTACGAGGAAGCAAGTCAAGTTGCTAACAATGCCGTTGGGAATATAAGAACAATTGCTTCTTTCTGTGCCGAAAGGAAGGTGATGGCACTATACAGAAAGAAATGTGAAGGTCCAAGGAACAGGGGGATAAGGCAAGGATTGGTTACTGGGATCAGTTTTGGGCTCTCCTTTTTCTTTCTCTTCTGTGGCTATGCAATCAGTTTCTATGCAGGAGCCCGGCTTGTTGAGGAGGGAAAAACAACATTCGCAAAGGTTTTTCGAGTTTTCTTTGCTCTCAATATGGCAGCCATGTTAGTTACTCAGACAAGTTCTTTGGCACCCGATGCCTCCAAAGCCAAGGCTTCTGCTGCTTCTGTATTTGCAATTCTTGATAGGAAGTCAAAGATAGATCCAAGTGACAACTCTGGGATGACATTAGAAAATGTGAAGGGTGACATTGAGTTTCAGAAAGTCAACTTCAAGTACCCGATGAGGCCGGATGTTCAGATTTTCCGAGATCTATGCATTGCTGTTCAATCCGGCAAGGGGTATGACACGTTAGTAGGGGAGCGAGGGGTTCAATTGTCAGGCGGGCAAAAGCAACGTGTGGCAATTGCACGTGCCATAGTTAAAGCACCAAAAATTTTACTACTGGACGAGGCAACGAGTGCACTAGATGCTGAATCGGAGCAAGTGGTACAAGATGGATTGGACGGAGTCATGGTGGGCCGGACCACAATCGTGGTGGCCCACCGTTTATCGACAATTATGGGAGCAGATATAATCGCTGTCGTTAAAGATGGGATTATCACAGAGAAAGGAACGCACGAGGCTTTGATCAACATCAAGGATGGGGTTTATGCTTCCTTAGTAGCACTTCACCTGAATATTTCATCTTAG 1992 0.4508 MVGEHGTQLSGGQKQRVAIARAILRDPRILLLDEATSALDAESERIVQEALDRIMINRTTIIVAHRLSTVRNANVIALIHKGKIVEKGSHSELLNDSNGAYSQLIHLQEVNQEASTTDQDKSEGSLDSQRKSNECLSFERPSSRQSSSDSLGLPSVVDIEETGSTELDTPTPLQRPYEVPLRHLAYLNKPELPVLLLGAVAAVINGSVLPIFGVLISSMIKTFYEPPEKLRKDSRFWCWMFVMAGFISFMSSIGKSYFFGIAGNQLIRRIRLLSFEKVVHMEIGWFDDAQNSSSTIGARLSIDAATIRGLVGDALALIVQNSAAVIVGLVIALEANWQLALIIVSLLPLLAVNGWAYTMLIKGFSANAKMMYEEASQVANNAVGNIRTIASFCAERKVMALYRKKCEGPRNRGIRQGLVTGISFGLSFFFLFCGYAISFYAGARLVEEGKTTFAKVFRVFFALNMAAMLVTQTSSLAPDASKAKASAASVFAILDRKSKIDPSDNSGMTLENVKGDIEFQKVNFKYPMRPDVQIFRDLCIAVQSGKGYDTLVGERGVQLSGGQKQRVAIARAIVKAPKILLLDEATSALDAESEQVVQDGLDGVMVGRTTIVVAHRLSTIMGADIIAVVKDGIITEKGTHEALINIKDGVYASLVALHLNISS* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01353 663 MobiDBLite consensus disorder prediction 112 152 - -
Eupl12g01353 663 ProSitePatterns ABC transporters family signature. 559 573 IPR017871 GO:0005524|GO:0016887
Eupl12g01353 663 FunFam Uncharacterized protein 481 507 - -
Eupl12g01353 663 FunFam ABC transporter B family member 1 175 480 - -
Eupl12g01353 663 MobiDBLite consensus disorder prediction 129 152 - -
Eupl12g01353 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 543 657 IPR027417 -
Eupl12g01353 663 Gene3D - 1 109 IPR027417 -
Eupl12g01353 663 Gene3D - 547 658 IPR027417 -
Eupl12g01353 663 Gene3D - 507 546 IPR027417 -
Eupl12g01353 663 PANTHER ABC TRANSPORTER B FAMILY 182 546 IPR039421 -
Eupl12g01353 663 Pfam ABC transporter transmembrane region 195 467 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl12g01353 663 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 196 482 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl12g01353 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 108 IPR027417 -
Eupl12g01353 663 SUPERFAMILY ABC transporter transmembrane region 182 501 IPR036640 GO:0005524|GO:0016020
Eupl12g01353 663 Pfam ABC transporter 3 37 IPR003439 GO:0005524
Eupl12g01353 663 Pfam ABC transporter 449 587 IPR003439 GO:0005524
Eupl12g01353 663 CDD ABC_6TM_Pgp_ABCB1_D2_like 185 500 - -
Eupl12g01353 663 Gene3D ABC transporter type 1, transmembrane domain 182 483 IPR036640 GO:0005524|GO:0016020
Eupl12g01353 663 Gene3D ABC transporter type 1, transmembrane domain 484 506 IPR036640 GO:0005524|GO:0016020
Eupl12g01353 663 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 414 656 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01353 Eupl-Chr12 30177673 30181861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01353 547 658 Calmodulin-binding Proteins AT2G36910 61.947 3.01e-37 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01353 K05658 - msin:131225768 704.131