Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01352 ATGAAGGGACTAGACACCTTGGTTGGTGAGCACGGAACTCAGCTGTCTGGGGGTCAGAAGCAGAGAGTTGCCATAGCTAGAGCAATTCTGAAAGATCCACGGATTCTACTTTTAGATGAAGCTACAAGTGCACTTGATGCCGAGTCTGAGAGGATTGTGCAAGAGGCATTGGACAGGATCATGGTCAACCGAACTACTGTCATTGTCGCCCATCGCTTGAGCACGGTGAGGAATGCTGATATGATTGCTGTCATTCATCGAGGGAAGATTGTTGAAAAAGGTATTCACTCAGAGCTCCTCAATGATCCTGATGGAGCATACTCCCAGCTTATATGCTTGCAAGAAGTGAATAAAGAGTCGGAACACCAAGCAACAAACGATCAGGACAAATCGGAAATTACAGTGGAGTCTGGCAGGCACTCGAGCCAACGCATGTCCTTCCTACAATCCATAAGTCGGGGATCATCTGGTGTTGGAAACAGTAGCCGCCACTCATTCTCGGTATCATTTGGTCTACCTACAGGAATCAACATCCAAGAGACTGCCCAAACAGAACCCAATTCCCCTCCTCCACCACCTTCGGAACATCTACAGGAAGTTCCACTCCATCGCCTTGCCCATCTCAACAAGCCAGAGATCCCTGTTCTACTACTTGGTGTTGTCTCTGCAGTAGCCAATGGAGTTGTATTTCCAGCTTTTGGTATACTCTTTTCTGGTATGGTCAAAACATTCTATGAGCCACCCAGTAAGCTTCAGAAGGATTCAAAGTTTTGGTCATTGATGTTTGTCGTCGTTGGCCTGGTAGCATTAGTGGCATCCCCGGCAAGAACATACTTCTTTGCTGTGGCTGGATGTAGGTTAATAAAACGGATCAGGTCGATGTGCTTCGAAAAGGTGGTTCACATGGAGGTAGGTTGGTTTGATGAGCCTGCGAACTCAAGTGGCATGATCAGTGCGAGGCTCTCTGCAGATGCAGCAACTGTGCGCAGTCTAGTTGGGGATGCACTTGCTTTGCTAGTTCAGAACACAGCAACAGCAGTTGCTGCTTTGGCTATCTCTTTCGAAGCAAGCTGGCAATTGGCTCTAATAATCCTTGTTTTGCTACCTCTGGTAGGACTTAATGGATGGGTTCAAATGAAGTTCATGCAAGGGTTCAGTGCAGATGCAAAGATGATGTATGAGCAAGCAAGTCAAGTTGCTATCGACGCAGTTGGGAGTATAAGGACAGTTGCTTCTTTCTGTGCTGAAGAAAAGGTGATGCAATTGTACAAAAAGAAATGTGAAGGCCCAATGAAGACAGGAATAAAACAAGGGTTGATTAGTGGGTTTGGGTTTGGGCTTTCATTTTTCTTGCTATATTCTGTCTACGCAACCTGTTTCTATGCTGGAGCCCGACTTGTTGAGGATGGAAAGACAACATTCTCGAAGGTTTTCCGTGTTTTCTTTGCTCTGACTGTCGCAGCAGTTGGAATTTCTCAATCGAGCTCCTTTGCACCAGATTCCAGTAAAGCTAAGATTTCTACTGCTTCCATATTTGCAATTCTCGACCGAAAGTCGAAGATAGACCCAAGCGATGATTCTGGAATGATGTTAGAAAACATAAAAGGCGAAATTGAGTTTCGAAATGTCAGTTTTAAGTACCCAACAAGGCCTGATGTTCAGATTTTTCGAGACCTTTGTTTAGCCATTCATTCCAGCAAGACGTTCGCCCTGGTCGGAGAAAGTGGGAGTGGGAAATCTACAGTGATCTCATTGTTGCAGAGATTTTATGACCCTGATTCAGGTAACATCATGCTAGACGGGATCGAAATTCAGAAGTTCCAATTGAGTTGGTTGAGGCAGCAGATGGGTCTAGTTAGCCAAGAACCTGTGTTGTTCAATGACACAATCCGAGCCAACATTGCATATGGAAAGGAAGGAAATGCGACGGAGGCAGAGATTTTAGCTGCAGCAGAGCTAGCAAATGCCCACAACTTCATTAGTGGATTGAAACAGGGGTATGATACAGTGGTAGGTGAGAGAGGAGTCCGATTATCAGGTGGGCAGAAGCAACGGGTGGCAATTGCCCGTGCTATAGTGAAAGGACCAAAGATTTTACTACTGGATGAGGCCACGAGCGCACTTGATGCTGAATCGGAACGAGTGGTTCAAGATGCATTGGAGAGAGTCATGGTGGACCGGACCACAGTCGTGGTGGCCCACCGTTTATCGACAATTAAGAATGCAGATTTAATTGCTGTTGTTAAAAATGGAGTTATTGCAGAGAAAGGAAAGCATGAGACATTAATCAAAATCAAGGATGGAGTTTACGCCTCCCTGGTAGCACTTCACATGAGTGCTTCATCTTAA 2349 0.4564 MKGLDTLVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGIHSELLNDPDGAYSQLICLQEVNKESEHQATNDQDKSEITVESGRHSSQRMSFLQSISRGSSGVGNSSRHSFSVSFGLPTGINIQETAQTEPNSPPPPPSEHLQEVPLHRLAHLNKPEIPVLLLGVVSAVANGVVFPAFGILFSGMVKTFYEPPSKLQKDSKFWSLMFVVVGLVALVASPARTYFFAVAGCRLIKRIRSMCFEKVVHMEVGWFDEPANSSGMISARLSADAATVRSLVGDALALLVQNTATAVAALAISFEASWQLALIILVLLPLVGLNGWVQMKFMQGFSADAKMMYEQASQVAIDAVGSIRTVASFCAEEKVMQLYKKKCEGPMKTGIKQGLISGFGFGLSFFLLYSVYATCFYAGARLVEDGKTTFSKVFRVFFALTVAAVGISQSSSFAPDSSKAKISTASIFAILDRKSKIDPSDDSGMMLENIKGEIEFRNVSFKYPTRPDVQIFRDLCLAIHSSKTFALVGESGSGKSTVISLLQRFYDPDSGNIMLDGIEIQKFQLSWLRQQMGLVSQEPVLFNDTIRANIAYGKEGNATEAEILAAAELANAHNFISGLKQGYDTVVGERGVRLSGGQKQRVAIARAIVKGPKILLLDEATSALDAESERVVQDALERVMVDRTTVVVAHRLSTIKNADLIAVVKNGVIAEKGKHETLIKIKDGVYASLVALHMSASS* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01352 782 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 217 503 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl12g01352 782 MobiDBLite consensus disorder prediction 138 164 - -
Eupl12g01352 782 Gene3D - 528 777 IPR027417 -
Eupl12g01352 782 Gene3D - 2 115 IPR027417 -
Eupl12g01352 782 Pfam ABC transporter 558 706 IPR003439 GO:0005524
Eupl12g01352 782 CDD ABC_6TM_Pgp_ABCB1_D2_like 208 521 - -
Eupl12g01352 782 FunFam ABC transporter B family member 1 528 778 - -
Eupl12g01352 782 ProSitePatterns ABC transporters family signature. 678 692 IPR017871 GO:0005524|GO:0016887
Eupl12g01352 782 CDD ABC_MTABC3_MDL1_MDL2 538 774 - -
Eupl12g01352 782 Pfam ABC transporter transmembrane region 216 488 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl12g01352 782 Pfam ABC transporter 4 43 IPR003439 GO:0005524
Eupl12g01352 782 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 527 776 IPR027417 -
Eupl12g01352 782 PANTHER ABC TRANSPORTER B FAMILY 194 776 IPR039421 -
Eupl12g01352 782 MobiDBLite consensus disorder prediction 119 164 - -
Eupl12g01352 782 FunFam ABC transporter B family member 1 196 504 - -
Eupl12g01352 782 Gene3D ABC transporter type 1, transmembrane domain 116 134 IPR036640 GO:0005524|GO:0016020
Eupl12g01352 782 Gene3D ABC transporter type 1, transmembrane domain 196 504 IPR036640 GO:0005524|GO:0016020
Eupl12g01352 782 Gene3D ABC transporter type 1, transmembrane domain 505 527 IPR036640 GO:0005524|GO:0016020
Eupl12g01352 782 MobiDBLite consensus disorder prediction 120 137 - -
Eupl12g01352 782 SUPERFAMILY ABC transporter transmembrane region 199 523 IPR036640 GO:0005524|GO:0016020
Eupl12g01352 782 SMART AAA_5 565 738 IPR003593 GO:0016887
Eupl12g01352 782 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 538 775 IPR003439 GO:0005524
Eupl12g01352 782 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 114 IPR027417 -
Eupl12g01352 782 FunFam ABC transporter B family member 9 505 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01352 Eupl-Chr12 30165051 30171991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01352 188 780 Calmodulin-binding Proteins AT2G36910 39.274 2.86e-135 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01352 K05658 - nnu:104607165 1248.8