Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01349 ATGGTGAGAGAGGCGGAGAAGAAGGGAATGCGACTGGGTAAGTACGAGCTCGGACGGACTCTCGGGGAGGGTAATTTCGGAAAGGTTAAATACGCGAAGAATCTCGAATCTGGTCAGGGTTTTGCAGTTAAGATATTGGAGAAAAAGAGGATTCTAGACCTCAATATCTCCGATCAGATAAAGAGAGAGATCAGCACGTTGAAGCTTTTGAAGCATCCAAACGTCGTCAGATTACATGAGGTCTTAGCAAGCAAAACTAAGATTTACATGGTTCTTGAATACGTGACTGGCGGCGAATTATTTGACAGAATTGAATTGAAAGGGAGGTTTTCAGAAGACGAAGGCCGGAAGCTCTTCCAACAGTTAATCGATGGTGTGAGCTACTGTCATGACAAAGGTGCCTACCATAGGGATCTGAAGCCGGAGAACGTTCTTGTTGATGCTAAAGGAAACATAAAGATATCTGATTTTGGCCTCAGTGCTTTACCTCAACATTTTAGGGACGACGGATTACTGCATACAACCTGTGGGAGTCCCAACTATGTTGCCCCAGAGGTTCTTGCCAATAGAGGGTATGACGGCGCCACATCTGACCTCTGGTCGTGTGGTGTTATCTTGTATGTGGTTCTTACAGGCTCTCTCCCTTTTGACGATCGAAATCTCGCAGTTCTCTATCATAAGATATTCAAGGGAGATGCTCAGATTCCCAAATGGCTTTCTACGGGTGCTCAAAACATGATAAGGAGGATTCTTGATCCCAATCCCAAGACCCGGATAACAATGGATGACATCAAAGAAGACGAGTGGTTCAAGCAAGATTATACTCCTGCTAATCCCGAAGATGAAGAAGAAAACATCTACATTGATGATGAAGCCTTCTCAATACAAGACAAGCCACTGGATATGGAGAAACATCCAGAGTCACCCACACTAATCAATGCCTTTCAGCTTATCGGAATGTCTTCGTGCCTGGATCTTTCGGGCTTCTTTGAGAAAGAGGATGCTTCAGAGAGGAAGATCAGATTCACGTCTAATCATTCCCCGAAAGATTTACTCGAGAAGATTGAAGATATTGTCACAAAGATGGGATTCCAAGTCCAGAAAAGAAATGGAAAGCTGAAGGTGATGCAAGAGCATAAGGGTCAGAAGAGCATCGGTAACCTTTCGGTTGCAGCAGAGGTTTTTGAGATCAGTCCATCTCTGTATGTAGTGGAATTAAGAAAATCATACGGCGATATGTTATTGTATAGACAGTTGTGTACCAAGCTATCAAATGATCTGGGTGTCTGCCAGAGCCAACAGCTTCTGACTACGCACGTGCAAAATCCAGAGTTCGTTAGGATAAACACCGTAGATGGATAA 1362 0.4398 MVREAEKKGMRLGKYELGRTLGEGNFGKVKYAKNLESGQGFAVKILEKKRILDLNISDQIKREISTLKLLKHPNVVRLHEVLASKTKIYMVLEYVTGGELFDRIELKGRFSEDEGRKLFQQLIDGVSYCHDKGAYHRDLKPENVLVDAKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDLWSCGVILYVVLTGSLPFDDRNLAVLYHKIFKGDAQIPKWLSTGAQNMIRRILDPNPKTRITMDDIKEDEWFKQDYTPANPEDEEENIYIDDEAFSIQDKPLDMEKHPESPTLINAFQLIGMSSCLDLSGFFEKEDASERKIRFTSNHSPKDLLEKIEDIVTKMGFQVQKRNGKLKVMQEHKGQKSIGNLSVAAEVFEISPSLYVVELRKSYGDMLLYRQLCTKLSNDLGVCQSQQLLTTHVQNPEFVRINTVDG* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01349 453 SMART serkin_6 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g01349 453 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
Eupl12g01349 453 FunFam Non-specific serine/threonine protein kinase 6 94 - -
Eupl12g01349 453 SUPERFAMILY KA1-like 340 428 IPR028375 -
Eupl12g01349 453 Pfam Protein kinase domain 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g01349 453 Gene3D Transferase(Phosphotransferase) domain 1 7 313 - -
Eupl12g01349 453 ProSiteProfiles Protein kinase domain profile. 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g01349 453 Pfam NAF domain 309 368 IPR004041 GO:0007165
Eupl12g01349 453 CDD CIPK_C 313 424 - -
Eupl12g01349 453 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Eupl12g01349 453 FunFam Non-specific serine/threonine protein kinase 8 309 - -
Eupl12g01349 453 SUPERFAMILY Protein kinase-like (PK-like) 12 310 IPR011009 -
Eupl12g01349 453 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 412 - -
Eupl12g01349 453 FunFam Non-specific serine/threonine protein kinase 309 431 - -
Eupl12g01349 453 Gene3D Kinase associated domain 1, KA1 314 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01349 Eupl-Chr12 30122532 30130869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01349 78 438 CBL-interacting serine-threonine protein kinases AT3G17510 69.890 2.89e-179 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Eupl12g01349 Pkinase 3.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01349 K07198 - qsu:111997716 729.939