Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01343 ATGGGTGGTGGTGGAGGAAGTGAAACGACGCAGACGACGATGGTGGAGGAGGTAGGAGCAGAGGCACAGTACATAGAGGCTAAGACGTCGGTGTGGTGGGACATAGAGAACTGCCATGTCCCTAAAGGGTGCGATCCTCATGCGATTGCCCAGAATATCCGCTCCGCCCTGATTAAGATGAATTACTGTGGATCCGTCTCCATCGATGCCTATGGAGACACCAATCGACTCCCTTCGTCTGTGCAGCAAGCTCTCTCCAGCACTGGCATAGCACTCAATCACGTCCCCGCTGGTGTTAAAGATGCCAGTGATAAGAAGATTCTCGTGGACATGCTATTCTGGGCAGTGGACAATCCTGCCCCTGCAAATTATTTGCTGATTTCTGGTGATCGTGACTTCTCCAGTGCACTCCATCAGTTGCGTATGAGGAGATATAATATCCTTCTAGCACAGCCACAAAATGCATCTGCCCCACTTGTTGCTGCAGCAAAGAGTGTATGGCTTTGGACAAGTCTTCTGGCGGGAGGCCCCCCACGGACAAATGGGGAATCACCTCAGTTTGGTATTAATAACTACGTATCCAATGCCAACATGTTAAAAAACACAATTTCTGAACCCATGCAGATAAACAAATCTGTGGATCCTATTTCCGGAGCCCCCTCTTGGGGAAATCAAAATTTCTTTAGTACTGGAAAAGCTGGGGACACGAAATATAAAGGGAAACAAATTCGGAGAAACCTAAGTCAACCCAACATATCAAGAACCTCAAGTGTGCCAGTTGGGATTCAAGAAGGTCAGAGCAACGGAAGCTCTCACCAACCCAGATATGCACATGCGAAGCAGTTTAAGGAAGCTCCGCACGAATTCTTTGGTGCTAATAATCCGAAAGCCTCCTCTAGGCCTATGTCCAATTTCATTCCAGGCAATCCCGATCCTTCTTGGAACAACAGGAATAACTTACCCATCAACTACCAACATCAATATCCGCAGCCATTAAGGCCGAACAATTTTCCTATGCAACCTAATTTGGCACCAGGCAATTTCATTCCACCAAATTCTTATACTCATGGTCCTCATCAAGTGTCTTCCAGGCCTGATGGACCCACTTTTGCCACTGGTCCGCTTACAAACGTGCTTGGTAACAGTAAGGTAAATTTTTCAGAACACCCCAGCAGTGTTCACAATCGTCCTAGTTTTCAACAACAAAATGGAGGAGAGCCAAGGCCAAACTTTATCACAGAGTCTCCAAATCCTGCAAGCTTGAATGTCCCACAAAATATACATACAGTACACAGCGCTCCACCATTTTACCATGACACTCAGAACAATAGATATCCTCCTCATGGTCTCGAGTACCTGCCCCCATCATCCTCTGCAATGGGTCCTAACCCCAATCCCAGTAATGGTGTCTGGGGGGCTTCAGGATACCCAAAACCTTCTGAATATGTCCAAGGCCTTATAGGGGTTGTCTTACTTGCCTTGAACACCCTAAAAAATGATAAGATGACCCCAACGGAAGCAAACATAGCTGATTGCATTCGCTATGGAGATCCTAAGCACCGGAATACTGATGTTAAGAAGGCCTTGGACAGTGCCATCGAGCAACAGATGGTCGTGAAGCACAGTGTTGGTGAATTGCAGTTTTATGTTGGTAAGAATGCGAAACTTTGGAAGTGTGTGAATCCTATAGGTGGTGATCCTAAGCAGTACTCGAAAGCAGTATGGGATGGAATCCAGAAATTTCTAAGTTCTCCTGGTGGACGGTCTGCCATGATGGCTTCTCAATGCAGGTATGAAGCAGCTACTATTTTAAAGAATTTATGCTTGAAAGATCTTGTTTTGGGTGATACACTCCAGATTTTGGATATGGTAATAACCATCAAGAGGTGGATCCTAGCTCATGCATCAGGCTGGCAGCCAATTACTATTACTTTTGCGGAGATTATTGCAGATGCAGGTACTGGAACTGGTGCTTGA 1977 0.4613 MGGGGGSETTQTTMVEEVGAEAQYIEAKTSVWWDIENCHVPKGCDPHAIAQNIRSALIKMNYCGSVSIDAYGDTNRLPSSVQQALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSSALHQLRMRRYNILLAQPQNASAPLVAAAKSVWLWTSLLAGGPPRTNGESPQFGINNYVSNANMLKNTISEPMQINKSVDPISGAPSWGNQNFFSTGKAGDTKYKGKQIRRNLSQPNISRTSSVPVGIQEGQSNGSSHQPRYAHAKQFKEAPHEFFGANNPKASSRPMSNFIPGNPDPSWNNRNNLPINYQHQYPQPLRPNNFPMQPNLAPGNFIPPNSYTHGPHQVSSRPDGPTFATGPLTNVLGNSKVNFSEHPSSVHNRPSFQQQNGGEPRPNFITESPNPASLNVPQNIHTVHSAPPFYHDTQNNRYPPHGLEYLPPSSSAMGPNPNPSNGVWGASGYPKPSEYVQGLIGVVLLALNTLKNDKMTPTEANIADCIRYGDPKHRNTDVKKALDSAIEQQMVVKHSVGELQFYVGKNAKLWKCVNPIGGDPKQYSKAVWDGIQKFLSSPGGRSAMMASQCRYEAATILKNLCLKDLVLGDTLQILDMVITIKRWILAHASGWQPITITFAEIIADAGTGTGA* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01343 658 Gene3D - 22 171 - -
Eupl12g01343 658 PANTHER LIMKAIN B LKAP 26 538 IPR024768 GO:0005777|GO:0010468
Eupl12g01343 658 Pfam NYN domain 28 164 IPR021139 GO:0004540
Eupl12g01343 658 MobiDBLite consensus disorder prediction 354 439 - -
Eupl12g01343 658 MobiDBLite consensus disorder prediction 354 450 - -
Eupl12g01343 658 CDD PIN_limkain_b1_N_like 28 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01343 Eupl-Chr12 30074837 30079404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01343 20 272 C2H2 Transcription Factor Family AT5G61190 60.311 2.51e-83 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01343 - - nnu:104607146 919.072