Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01327 ATGGCTGATAGCAGAAGATACGCTTCTAATCAACAATTGGACATCACAAAGATACAAGTAGATGCACAAAACCGTTGGCTCCGTCCAGCTGAAGTTTGTGAGATCCTTCGTAACTATCAAAAGTTCTGCTTAACGCTAGATCCACCCCATAAGCCTCCAGGTGGCTCTTTGTTCTTGTTTGATCGAAAAGCTCTTCGATATTTCCGTAAGGATGGCCACAGTTGGAGAAAGAAGAAAGATGGAAAAACTGTCCGGGAAGCTCACGAAAAATTAAAGGCTGGCAGTGTGGATGTTCTTCATTGCTACTATGCCCATGGTGAGGACAATGAGAACTTCCAGAGGCGGTGTTATTGGATGCTTGATGTGCAGTTGGAACACATTGTTCTCGTGCATTACAGGGAGGTAAAAGAGGGGAACAGGTCTGGCATCCCCAGTTTGTTAAATGCAGATCCAGGAACACAGATTGGAAATGTTCCAACCAGTTCAGCACCTTGCTCTGCCCAGACGGACTCTCCTGTTTTTACATTTCCGGCATCTTATGCATCAAGCCCAAGTACAACCAACTGGCATGGACAGACACTATCTCCTGAAATCGAGGATGTAGAGTCTGGGGATGATCTGGGATCCTCCTCTCTTGCTGAAGGCATCTCTTGTTCTGGATCTCAGAACGCTTCTATACATGCACATGACACAGCAGGATTTTCCAGGTCATCAAGGAACCATCTTGGTGCAGAGTTTGGTGGAGTTAGTTTTAGTCACGATGCTAGGCCATCAATGTGGTCTGAAATTCACAGCTCAAGCAGAAACATAAGTAGCATGCATGAGCAGAAGATTTCCTTTGACCAGCCTAATGTTGGTGATGTTATTTCTAGAAAACTGGCAGACACTAAATTAGGTGCCTATAGCTTGCTCAACGATGGCCTAACTAGTGGAGATGTGGTGTTTCCTGATACACATTTCCAAACATCAGTGAGAGATTCTCAGAGACTCGTTCAGGAACATCGGAAAAATGAGAATGTTGGGCATGCGGATTATTTTACCTCTGACAAACGCGCACTGAGTAGCGCAGATAATATGTTCCAGTTGTCACAAGAGCATGATTTCCATTTAGTTGATCCTCAGTTTCAGAACAATTCTGGGTCTCACTCTCACATGCTTTTAATTGATAATGACCACTCCTTAGAATCTGAAAAGACCGCACCAGAAGGTGATTCATATAATGATGAATCAGGAGAGCTGAAGAAACTTGACAGCTTTGGGAGATGGATGAATAAAGAGATTGGTGGGGATTGTGATGAATCCTTGATGGCTTCGGACTCTGGCAATTACTGGAATACACTTGATACTCAGAATGATGACAAGGAAGTCTCCAGTCTATCACGCCATATGCAGTTGGATATTGATTCACTGGGCCCTTCCCTTTCCAAAGAACAGCTATTTAGCATCCGTGATTTCTCACCAGATTGGGCTTATTCTGGGGTTGAAACAAAGGTATTGATCTCAGGTACATTTCTGGGAGATTTAAAACATCCTAGTAGCATTAAGTGGTGCTGTATGTTTGGTGAAGTTGAGGTTCCTGTTGATGTTTTAACTGATAATGTCCTTCGATGTCAAGCTCCTGTACATGCTCCAGGACGCATTCCATTTTATATCACCTGCAGTAACAGGTTGGCCTGTAGCGAGGTGCGGGAGTTTGAATATCGTGAAAAGCCATCAGGAGACACATTATCCATAGCTGTTAGAAGTGAACCGGAAGATGAAATGCGTCTTCAAATACGTTTTGCAAAATTGTTATATCTAGGATTAGACAGGAAATGGATAGATTGCTCTGTTGAGAAATGTGATAAATGCAGCTTAAAGAATAATATATATTCAATGCAAAGTGATGATGAAAAAGAGTGGGGACAGATTGAGAATGCTCCCATGGCCTTTGAAGGAAATCCTGAAAATTCTAGAGACGCATTGATCCAGAAGTTGCTGAAGGACAGATTATATGAGTGGCTTGTTTGTAAAGTCCACGAAGGAGGCAAAGGACCACATATTTTGGATGACGAAGGCCAAGGAGTTATCCACTTGGCAGCAGCTCTTGGTTATGAATGGGCCATGGGTCCGATAGTTGCTGCTGGCATCAGTCCTAGTTTTAGAGATGCACGTGGAAGGACAGGGCTCCACTGGGCAGCATATTTTGGGAGGGAGGAAACCGTAGTTGTACTTATTAGACTGGGTTCAGCCCCTGGTGCAGTAGACGACCCCTCGTCAATATTTCCTGGAGGACGAACAGCTGCTGATTTAGCATCAAGTAGAGGACATAAAGGGATTGCTGGATATTTAGCTGAGGCAGATTTGACTAGTCACCTTTCTTCATTGACTCTGAAGGAAAGCGTCATGGGCAGTGTTGCTGCAACAATTGCTGCAGAAAAGGCTGTTGAGACTATGGAGGAGCAAAGTCTTGTCCCTCTAGATGGAGTCAGAGAGGGGCAGTTATCCCTGAGAGGGTCCCTTGCTGCTGTAAAGAAATCTGCTCAAGCAGCGGCTTTAATTCAAGCTGCCTTCCGTTCTCGTTCATTCCGTCATAGACAGTTAACAAAGAACAATGATGAAAATGCTGAAATTTCAACCGACCTAGTAGCTTTTGCCTCTTTAAACAACAAAGCGCAAAAGACGAGTCACTTTAGTGATTATTTGCATGTGGCAGCAGTAAAAATCCAACAAAAGTATCGTGGTTGGAAGGGACGTAATGAATTTCTAAAGATACGCAACCGTATTGTAAAAATCCAGGCACATGTGAGGGGACATCAAGTTCGTAAGCAATATAAAAAAGTCATCTGGTCTGTTAGTGTTGTTGAAAAAGCTATACTGCGTTGGAGGCGAAAAGGAGCTGGGTTGCGAGGCTTTCGAGCTGACAAAGCAATTCAATATGCCGAACCTGAAATTGGGAAGACTGATGAGTATGAGTTTCTGAGTCTTGGTCGGAAACAGAAAGTTGCTGGCGTAGAGAAAGCTCTAGCAAGAGTTAAATCCATGGTTCGATATTCGGAAGCACGTGATCAGTATATGAGACTGGTTACAAGTTTTCAGAAATCAAAGTTGGGAGATGAGGCAAGTGGCACAACTTCACAAGTTCAAAGTTTGGGAAAAAGTACAACCGACGAAGATCCACTTGCACTTGCACCTGCACCCTTGACAGATTAA 3192 0.4367 MADSRRYASNQQLDITKIQVDAQNRWLRPAEVCEILRNYQKFCLTLDPPHKPPGGSLFLFDRKALRYFRKDGHSWRKKKDGKTVREAHEKLKAGSVDVLHCYYAHGEDNENFQRRCYWMLDVQLEHIVLVHYREVKEGNRSGIPSLLNADPGTQIGNVPTSSAPCSAQTDSPVFTFPASYASSPSTTNWHGQTLSPEIEDVESGDDLGSSSLAEGISCSGSQNASIHAHDTAGFSRSSRNHLGAEFGGVSFSHDARPSMWSEIHSSSRNISSMHEQKISFDQPNVGDVISRKLADTKLGAYSLLNDGLTSGDVVFPDTHFQTSVRDSQRLVQEHRKNENVGHADYFTSDKRALSSADNMFQLSQEHDFHLVDPQFQNNSGSHSHMLLIDNDHSLESEKTAPEGDSYNDESGELKKLDSFGRWMNKEIGGDCDESLMASDSGNYWNTLDTQNDDKEVSSLSRHMQLDIDSLGPSLSKEQLFSIRDFSPDWAYSGVETKVLISGTFLGDLKHPSSIKWCCMFGEVEVPVDVLTDNVLRCQAPVHAPGRIPFYITCSNRLACSEVREFEYREKPSGDTLSIAVRSEPEDEMRLQIRFAKLLYLGLDRKWIDCSVEKCDKCSLKNNIYSMQSDDEKEWGQIENAPMAFEGNPENSRDALIQKLLKDRLYEWLVCKVHEGGKGPHILDDEGQGVIHLAAALGYEWAMGPIVAAGISPSFRDARGRTGLHWAAYFGREETVVVLIRLGSAPGAVDDPSSIFPGGRTAADLASSRGHKGIAGYLAEADLTSHLSSLTLKESVMGSVAATIAAEKAVETMEEQSLVPLDGVREGQLSLRGSLAAVKKSAQAAALIQAAFRSRSFRHRQLTKNNDENAEISTDLVAFASLNNKAQKTSHFSDYLHVAAVKIQQKYRGWKGRNEFLKIRNRIVKIQAHVRGHQVRKQYKKVIWSVSVVEKAILRWRRKGAGLRGFRADKAIQYAEPEIGKTDEYEFLSLGRKQKVAGVEKALARVKSMVRYSEARDQYMRLVTSFQKSKLGDEASGTTSQVQSLGKSTTDEDPLALAPAPLTD* 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01327 1063 Gene3D - 648 788 IPR036770 -
Eupl12g01327 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 884 946 IPR027417 -
Eupl12g01327 1063 ProSiteProfiles Ankyrin repeat region circular profile. 718 750 - -
Eupl12g01327 1063 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Eupl12g01327 1063 Gene3D - 892 942 - -
Eupl12g01327 1063 Pfam CG-1 domain 22 134 IPR005559 GO:0003677
Eupl12g01327 1063 SUPERFAMILY E set domains 482 568 IPR014756 -
Eupl12g01327 1063 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1026 - -
Eupl12g01327 1063 MobiDBLite consensus disorder prediction 1031 1049 - -
Eupl12g01327 1063 SMART CG_1_2 18 136 IPR005559 GO:0003677
Eupl12g01327 1063 FunFam Calmodulin-binding transcription activator 2 475 572 - -
Eupl12g01327 1063 Pfam IQ calmodulin-binding motif 921 939 IPR000048 GO:0005515
Eupl12g01327 1063 Pfam IQ calmodulin-binding motif 897 915 IPR000048 GO:0005515
Eupl12g01327 1063 ProSiteProfiles IQ motif profile. 918 946 IPR000048 GO:0005515
Eupl12g01327 1063 ProSiteProfiles IQ motif profile. 895 924 IPR000048 GO:0005515
Eupl12g01327 1063 MobiDBLite consensus disorder prediction 1031 1063 - -
Eupl12g01327 1063 Gene3D Immunoglobulins 475 574 IPR013783 -
Eupl12g01327 1063 ProSiteProfiles Ankyrin repeat profile. 718 750 IPR002110 GO:0005515
Eupl12g01327 1063 Pfam IPT/TIG domain 482 567 IPR002909 -
Eupl12g01327 1063 SUPERFAMILY Ankyrin repeat 669 780 IPR036770 -
Eupl12g01327 1063 SMART ANK_2a 718 747 IPR002110 GO:0005515
Eupl12g01327 1063 SMART ANK_2a 757 786 IPR002110 GO:0005515
Eupl12g01327 1063 SMART iq_5 894 916 IPR000048 GO:0005515
Eupl12g01327 1063 SMART iq_5 917 939 IPR000048 GO:0005515
Eupl12g01327 1063 SMART iq_5 839 861 IPR000048 GO:0005515
Eupl12g01327 1063 FunFam Calmodulin-binding transcription activator 2 894 942 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01327 Eupl-Chr12 29880998 29901527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01327 1 1023 CAMTA Transcription Factor Family AT5G64220 42.002 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Eupl12g01327 CG-1 6.2e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01327 K21596 - ming:122091496 1508.81