Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01297 ATGGCGGTGGAAGCGGAGGCTGTAACAGCAGAGTTGGCTCTATCAGATACCGACATCAATTGGGACAGGTTGGACAAGACTAGGTTTCATGTCATTGGAGCTATTCTCTTTACTGCTCAATTGGCTGTACTACATCCAATAGCAGTTATAAAGACTAGAATGCAAGTCGCTTCATCCGGTCTTGCCCACATGCGTGGAATATCAGTATTTAGGCATGTATTGAAAAATGATGGCATTCCTGGCATTTTCAGAGGTTTCGGCACTTCCTCCATTGGGTCATTGCCGGGTAGGGTCTTGACCTTGACATCACTCGAAGTATCGAAAGATATGATGCTAAAATACACTGAAGGCTTGGATATGCCTGAAGCAACACGTGTTGGTATTGCGAATGGGGTGGCAGGCATGCTGTCAAATCTAGTTTCTTGTGTATACTTTGTGCCTTTGGATGTGATTTGCCAGAGACTAATGGTCCAAGGCCTTCCAGGGACTACAGTTTGTAATGGGCCATTCGATGTAGTCTGTAAAGTGATCAAGGCTGAGGGGTTTCGTGGGCTGTATAGAGGTTTTGGATTAACAGCTGTGACCCTATCCCCTGCGTCCGCACTGTGGTGGGGTGCCTATGGTTCCGCTCAGCATGCCATTTGGAGGAGCTTGGGCTATAGAAATGACGTGGAGACCAGACCATCTCATATGGAGATGGTGACGGTTCAGGGTACGGCAGGAACAGTGGCTGGTGCTTGTTCTTCAGTTATTACTACTCCCATAGACACAATAAAGACGCGGCTTCAGGTCATGGATAATTATGGTGTTGGAAGACCATCTGTTATCAAGACTGCAAAGGCACTCCTGAAGGAAGATGGGTGGAGAGGCTTCTATAGAGGGTTCGGACCTCGGTTCTTAAATATGTCACTCTATGGGACTTCGATGATCGTTACTTATGAACTGATAAAGAGGTTATCGGTAAAGCAAGCGTGA 975 0.4677 MAVEAEAVTAELALSDTDINWDRLDKTRFHVIGAILFTAQLAVLHPIAVIKTRMQVASSGLAHMRGISVFRHVLKNDGIPGIFRGFGTSSIGSLPGRVLTLTSLEVSKDMMLKYTEGLDMPEATRVGIANGVAGMLSNLVSCVYFVPLDVICQRLMVQGLPGTTVCNGPFDVVCKVIKAEGFRGLYRGFGLTAVTLSPASALWWGAYGSAQHAIWRSLGYRNDVETRPSHMEMVTVQGTAGTVAGACSSVITTPIDTIKTRLQVMDNYGVGRPSVIKTAKALLKEDGWRGFYRGFGPRFLNMSLYGTSMIVTYELIKRLSVKQA* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01297 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 110 IPR018108 -
Eupl12g01297 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 319 IPR018108 -
Eupl12g01297 324 SUPERFAMILY Mitochondrial carrier 22 315 IPR023395 -
Eupl12g01297 324 PRINTS Mitochondrial carrier protein signature 42 56 IPR002067 GO:0055085
Eupl12g01297 324 PRINTS Mitochondrial carrier protein signature 140 158 IPR002067 GO:0055085
Eupl12g01297 324 PRINTS Mitochondrial carrier protein signature 241 263 IPR002067 GO:0055085
Eupl12g01297 324 PRINTS Mitochondrial carrier protein signature 186 204 IPR002067 GO:0055085
Eupl12g01297 324 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 323 - -
Eupl12g01297 324 Gene3D Mitochondrial carrier domain 31 324 IPR023395 -
Eupl12g01297 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 213 IPR018108 -
Eupl12g01297 324 Pfam Mitochondrial carrier protein 32 114 IPR018108 -
Eupl12g01297 324 Pfam Mitochondrial carrier protein 129 215 IPR018108 -
Eupl12g01297 324 Pfam Mitochondrial carrier protein 237 322 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01297 Eupl-Chr12 29630952 29636349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01297 16 319 Chloroplast and Mitochondria Gene Families AT5G15640 52.941 4.35e-113 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01297 K15121 - ming:122090769 569.311