Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01295 ATGCTTCTGCAACAGAACAGTACTACGATAATGGCAGAAAAGCTCAATCCAACGATCGAGATTAACAATCTCAGATTCACGTATCCAGGCATCGATGGTCACCCTCCGCCCGGGTCCACTCCTTTGATCGACGAATTCTCTTTGTCTCTAAATTCCGGAGATCGTTGCCTTCTGGTCGGATCTAATGGCGCTGGGAAGACGACGATTCTGAAAATATTGGGAGGAAAGCACATGGTGGAGCCCCACATGGTTCGCGTGCTCGGACGATCGGCTTTCCACGATACTGCTTTGACGTCCTCTGGTGATCTCGGCTATCTCGGCGGAGAGTGGAGGCGAGATGTTGCTTTTGCCGGGTTTGAGGTTCCGATACAAATGGATGTTTCTGCAGAGAAAATGTTATTTGGGGTTTCGGGTATCGATCCTCAAAGGAGAGCTGAACTCGTAAAGGTATTAGATGTTGATCTATCATGGAGAATGCACAAGGTATCCGATGGTCAGAGAAGACGAGTGCAAATTTGCATGGGTCTCCTCAAGCCATTTAAGGTTCTTCTTCTTGATGAGATAACTGTTGACCTCGACGTGCTGGCGAGGGCTGACCTTTTGAAATTCCTCCGAAAGGAATGCGAAGAGCGAGGTGCCACAATTATATATGCAACCCACATATTTGACGGTCTTGAGGGTTGGCCTTCACATATTGTTTATGTTGCCCATGGGAAGTTGCAATTAGCAATGCCAATGGAAAAAGTAAGGGAGATTAGCAATTTGTCGCTGATGAGAACGGTGGAGAGTTGGCTAAGGAAAGAGAGAGAGGAGCAGAGGAAGAGAAGGAAAGAGAGGAAGGTGAGTGGCATTTCAGAATTTGAAAAGCAAGTTGAGGGCAGTCGAGTGACTGGGGATCCAGCCCGTAGTGCCGTTCGTGCAATGAACAATGGTTGGGCTGCAGGAAGGCTTCACTCCACCATAGCAGGTGAGGAAAATTTCTTCTTCAGCTCAAACAGTGTTCTGAGGCAGTAG 1014 0.4793 MLLQQNSTTIMAEKLNPTIEINNLRFTYPGIDGHPPPGSTPLIDEFSLSLNSGDRCLLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTALTSSGDLGYLGGEWRRDVAFAGFEVPIQMDVSAEKMLFGVSGIDPQRRAELVKVLDVDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEGWPSHIVYVAHGKLQLAMPMEKVREISNLSLMRTVESWLRKEREEQRKRRKERKVSGISEFEKQVEGSRVTGDPARSAVRAMNNGWAAGRLHSTIAGEENFFFSSNSVLRQ* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01295 337 SMART AAA_5 52 239 IPR003593 GO:0016887
Eupl12g01295 337 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 255 IPR027417 -
Eupl12g01295 337 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 18 267 - -
Eupl12g01295 337 Gene3D - 16 287 IPR027417 -
Eupl12g01295 337 Pfam ABC transporter 44 189 IPR003439 GO:0005524
Eupl12g01295 337 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 19 262 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01295 Eupl-Chr12 29614298 29617733 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01295 19 193 Calmodulin-binding Proteins AT2G36910 26.455 4.53e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01295 K12608 - vvi:100259555 585.104