Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01284 ATGGATGCAAAGGACATCCTTGGTTTGCCCAAAACCCCCTTTTCAGCAACTCAGGAGAAGAAATCTCGACCCCAAAAGGATTCTCAGAGAAAACCAGATGGAATTTCTCGGGAGGTTTACGCGCTTACAGGTGGTTTGGCGCCTTTCATTCCATCACTCGACCCCTCTCACTTGAAACGGAAGTCTCAGTCAGACAAAGAAAAGATCACCTGGCAATGGCTTCCATTTACATCTTCTGCTCGTACAGATAATTTGCAACTTTATCATTGGGTCAGAGTTGTAAATGGTGTTACACCAACCGGTGACTATTCTTTTGCTAAATGTAACAAGTCCGTCGACATTGTCAAATACACAGATGAGGAGTACGAAAAGTATTTGACTGATCCTACGTGGACAAAGGAAGAGACGGATAAATTATTTGACTTGTGTGAACGGTTCGATCTGCGTTTTATTGTGATAGCTGACAGGCTTCCATCATCTCGAAGTGTTGAGGAATTGAAGAGTCGTTATTATGCAGTAACTCAGGCTATTGTGGTTGGTAGAGCCCCATCCTCTGGTGGTGTTTCTGGGAATCCGCTTGTTAAGGAACCATACAATGTTCACCAAGAGATTGAACGCAAGCGTGCATTGTCAATGGTTCTTTCTCAAACAAAGCATCAGGAGCGTAAAGATGCTGAGGTTCTTGCTGAAGCAAAGCGAATAGCTGAGTTACGCATGGTTGCAAAGGGTGCTGAAGATGCAGAGTTGGCTGTGACATCAAGTGTTGATCCACAAAATAATGAAAGGGCTACTATTCCTGCTGAGTCTGTATCGCCGTCTTCCAACACTCATCTTCCAGCTGCAGCTGTTGCACCTCCAACGTCAACGGCAGATAGTGCCTCTACTCCAGCTTCACTTCGCATGCTCCGTGTATACTTGAGAACAAATGCACTTGACCAAATGGTGCAAGCTGCAAGCTCATCTGCTGGACTTCGAACTATCAAGCGGGTTGATCAGACTTTACAAGATCTTGGGGTTAACGTAAAACCAAAGGTTCTAACCAAAGCCGTTTGCGCAGAACATCTAGAATTACGAAAAGAAATACTGACTCTGCTAAATCTCCAGAAACAGTTGCAATATAAGGAGGCAGAAGTTTCTTCTCACCATGAGAGTTCATACACTGAGACACCAAGCACTCCCAAGCGCTCACACCGAGGTGGGGATCAGGATCGACCATTAATTTCTGATTCTATTAGTTTTGGAGGGGATAGAGTTGGTAAACGAGACCAGAAACGCAAGGCTCCTGGAAGATTTTCAGATGCACCGCCATCGCCCTCTCAGTCTAATAAGAGGCCTCGAAAGTTAAAGGCTTCTGATGGATGA 1362 0.4501 MDAKDILGLPKTPFSATQEKKSRPQKDSQRKPDGISREVYALTGGLAPFIPSLDPSHLKRKSQSDKEKITWQWLPFTSSARTDNLQLYHWVRVVNGVTPTGDYSFAKCNKSVDIVKYTDEEYEKYLTDPTWTKEETDKLFDLCERFDLRFIVIADRLPSSRSVEELKSRYYAVTQAIVVGRAPSSGGVSGNPLVKEPYNVHQEIERKRALSMVLSQTKHQERKDAEVLAEAKRIAELRMVAKGAEDAELAVTSSVDPQNNERATIPAESVSPSSNTHLPAAAVAPPTSTADSASTPASLRMLRVYLRTNALDQMVQAASSSAGLRTIKRVDQTLQDLGVNVKPKVLTKAVCAEHLELRKEILTLLNLQKQLQYKEAEVSSHHESSYTETPSTPKRSHRGGDQDRPLISDSISFGGDRVGKRDQKRKAPGRFSDAPPSPSQSNKRPRKLKASDG* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01284 453 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 1 433 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Eupl12g01284 453 MobiDBLite consensus disorder prediction 1 37 - -
Eupl12g01284 453 SUPERFAMILY Homeodomain-like 127 173 IPR009057 -
Eupl12g01284 453 SMART sant 127 176 IPR001005 -
Eupl12g01284 453 Gene3D - 100 185 - -
Eupl12g01284 453 MobiDBLite consensus disorder prediction 415 429 - -
Eupl12g01284 453 Pfam SANT/Myb-like domain of DAMP1 103 177 IPR032563 -
Eupl12g01284 453 MobiDBLite consensus disorder prediction 376 453 - -
Eupl12g01284 453 FunFam DNA methyltransferase 1-associated protein 1 99 186 - -
Eupl12g01284 453 MobiDBLite consensus disorder prediction 250 295 - -
Eupl12g01284 453 MobiDBLite consensus disorder prediction 20 34 - -
Eupl12g01284 453 MobiDBLite consensus disorder prediction 252 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01284 Eupl-Chr12 29518878 29527878 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl12g01284 SANT_DAMP1_like 9.2e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01284 K11324 - nnu:104586109 715.301