Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01282 ATGAGAGGAGGAGTAAATGCAAGGTTCAGAACAAAAATGGCATCACCAACTCCAACTATAAAACCCTTTTTTCTTCTCTTCTCCATCTTTTTCTCTCTTTCTTGCTTTATTCCAGCTATTGAACCATCAAAAACACACCCACAAGCCCATGAATCTGATAGAGTCATTAATCTCCCTGGTCAACCATCAAGCCCATCCATCACACACTTCTCAGGCTACATCACTGTTCATCAAAACCATGGCAGGGCCCTCTTCTACTGGTTCTTTCAAGCTCAATCTCAACCGTCCAAAAAACCTCTCCTTCTTTGGCTTAATGGAGGTCCTGGTTGTTCATCTATAGGATATGGGGCAGCTGTTGAGTTGGGTCCTCTCAGGGTCAAGAGAAATGGAGATGGGCTTGAGTTTAATAATTATGCTTGGAATAAAGAAGCAAATTTACTATTTGTGGAATCCCCAGTTGGAGTTGGGTTCTCTTACACCAACACATCTTCTGATCTCACCAAATTGGATGATGGATTTGTGGCTGAGGATACATACAATTTCATAGTCAATTGGCTGAAAAGATTTCCCCAGTTCAAGGCCCATGATTTTTTTATATCAGGAGAGAGTTATGCAGGTCACTATGTGCCTCAATTAGCCGAGCTTGTGTACGAGCGGAATAAGGATAAAAATAATAATTATCCATTTATTAACCTCAAAGGTTTCATAGTGGGGAATCCTGAAACAGAAGATTACTATGACTTAAAGGGGTTACTGGAATATTCATGGAGTCATGCAGTTATATCCGACCAAGTGTACGAACGAGCGAAACAAGTATGCGACTTCAAGCTCATCAACTGGACCGACGAATGTGCCGTGGCCATGAATGTAATATTCCAACAATACAGAGAGATCGATATCTACAATATCTACGCCCCGACATGTCTTCTTACCAGCAAATCTTCCGTAGCTGACGGTGGTGTTGGTATCGACACTTCTCGCCATAAGGCGGAAAATTATGGGTCGAGGAGAATGCGAATACCTGGAGGTTATGATCCGTGTTTCGCCGCATACACAGAGGCGTATCTAAATAGGGTTGATGTTCGATCATCCCTACATGCAAATGTTAATGGAAAATGGAAGGTCTGCAATGATTCCATATTTAGGACATATAGTTTTACGGTATTTTCAATTCTCCCCATCTACACCAAATTAATCAAAGCGGGTCTGAAGATATGGGTCTACAGCGGCGACACAGATGGCAGGGTCCCCGTGATAGGCTCCAGATACTGGGTCGAAGCTTTGGGTCTGCCCCTCAAAGCTCCATGGCGTTCATGGTACCACAAGAATCAGGTCGGGGGGAGGATAGTTGAGTATGAAGGGTTAACGTTTGTGACAGTTAAAGGGGCAGGTCACTTGGTTCCTCTCAATAAGCCAAGCGAGTCTCTCTCTCTCATTCACTCTTACTTGTCTGGTCAGAACCTACCAACACATAAATGA 1479 0.4334 MRGGVNARFRTKMASPTPTIKPFFLLFSIFFSLSCFIPAIEPSKTHPQAHESDRVINLPGQPSSPSITHFSGYITVHQNHGRALFYWFFQAQSQPSKKPLLLWLNGGPGCSSIGYGAAVELGPLRVKRNGDGLEFNNYAWNKEANLLFVESPVGVGFSYTNTSSDLTKLDDGFVAEDTYNFIVNWLKRFPQFKAHDFFISGESYAGHYVPQLAELVYERNKDKNNNYPFINLKGFIVGNPETEDYYDLKGLLEYSWSHAVISDQVYERAKQVCDFKLINWTDECAVAMNVIFQQYREIDIYNIYAPTCLLTSKSSVADGGVGIDTSRHKAENYGSRRMRIPGGYDPCFAAYTEAYLNRVDVRSSLHANVNGKWKVCNDSIFRTYSFTVFSILPIYTKLIKAGLKIWVYSGDTDGRVPVIGSRYWVEALGLPLKAPWRSWYHKNQVGGRIVEYEGLTFVTVKGAGHLVPLNKPSESLSLIHSYLSGQNLPTHK* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01282 492 SUPERFAMILY alpha/beta-Hydrolases 55 488 IPR029058 -
Eupl12g01282 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 185 210 IPR001563 GO:0004185|GO:0006508
Eupl12g01282 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 148 IPR001563 GO:0004185|GO:0006508
Eupl12g01282 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 149 159 IPR001563 GO:0004185|GO:0006508
Eupl12g01282 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Eupl12g01282 492 Gene3D - 391 485 - -
Eupl12g01282 492 ProSitePatterns Serine carboxypeptidases, histidine active site. 455 472 IPR033124 GO:0004185
Eupl12g01282 492 Pfam Serine carboxypeptidase 59 484 IPR001563 GO:0004185|GO:0006508
Eupl12g01282 492 ProSitePatterns Serine carboxypeptidases, serine active site. 199 206 IPR018202 GO:0004185
Eupl12g01282 492 Gene3D - 347 380 - -
Eupl12g01282 492 Gene3D alpha/beta hydrolase 49 310 IPR029058 -
Eupl12g01282 492 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Eupl12g01282 492 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 55 472 IPR001563 GO:0004185|GO:0006508
Eupl12g01282 492 FunFam Carboxypeptidase 391 485 - -
Eupl12g01282 492 FunFam Carboxypeptidase 49 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01282 Eupl-Chr12 29498277 29503774 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01282 327 488 Calmodulin-binding Proteins AT2G22960 31.395 1.06e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01282 K16297 - nnu:104607066 739.569