Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01277 ATGGCCGAGAAGAAACAAGAAGAAGAAGATGGAGTCCTACTTTACTACAAATACGCCTCTGTTCCAGACCTTCAGGAACTTGTTAGCTTCTACGATTCCAACTGCAAATCACTCGGCCTTCTTGGTCGAGTTCGTCTCGCTCCTGATGGTGTCAATGTAACTGTTGGTGGAAAGTTATCCTCGTTGGTGAAACACATTGCTGCAGTCAAGTTGAATAACTTATTTGAGGGTACTGACTTCAAGCTCGCATCTTGCCATTGCCCGTCAAATGACAGGATTGCAGAAGAATGTGGATTCACTTCTCTCTCCATTCGAGTTGTCAAGGAATTAGTTACTTTTAGTTCTCATCCACTATTGAAGTCACCAGCTATTTCAAATGCTGGGAGGCATCTCTCAGCAGTCGAGTTTCATTCTGTTCTCCAGAGTGCTGGAAATTTTACAGAAAGCGAGGGTTCCACTTGTCAGAAAGGGCTTCTTCTGTTGGATGCAAGAAATTTGTATGAGACAAGAATTGGGAAGTTCCAAACCCCAAATGTGGAGACTTTGGATCCAGAAATCAGGCAGTATAGTGATCTACCTTCTTGGATAGATAATCATTCTGAGCAGTTGCAGGGCAATTGTGTCCTCATGTACTGCACTGGAGGAATAAGGTGTGAGATGGCATCAGCCTATATTAGGTCAAAAGGTGCTAATTTTGACAATGTCTTCCAGTTATTTGGTGGAATACAGCGATATTTGGAACAATTTCCAGATGGTGGTTTTTTTAAAGGAAAGAATTTTGTTTTTGATCACAGGGTTTCTGTTGGAAGCTCAAATGCAGATATTGTTGGATCATGCATATTATGTGGTTCCTCCTTTGATGATTATTCATCACGTTGCCGATGCACATATTGTCGGATGCTGGTTTTGGTTTGTGATAATTGTCAGGAGAAGGATGGTGCCATATATGTTTGTGAGCTATGCCAGAAACATGGTAAGGGAGGCGGGCCAGTGCCATTGATTGAAAATAGCATAAATCAAACAAAATCAACACTGGTTGATGGGTCAGGAGCTGTTGAGCTTGAATCTGCTACCTCGAGTGATCATACCACATCCTTTCCTGAACTCCCCTGGAGACATGGCACTGGGCCTCCAAGAAAGCTGAGAATCTTATGCTTGCATGGATTTCGACAGAATGCATCCAATTTCAAGGGAAGAACTGCATCATTAGCTAAGAAACTCAGAAACATTGCAGAACTTGTTTTCATTGATGCACCCCATGAGTTGCCTTATATTTACCGACCACGTCCAACTGAAACAAGTCACAGTTCTGTAGAATCGCAATTACAACAAAGTCCTCCTCCATTGGAAAATTGTAAGAAAAAATTTGCGTGGTTAGTTGCACAGGGGTTCAACAACTTGAGGGGAACAGATTGGGAAATAGTGGATGAACGATTTGATCCTTTACAGTACCAGCAACAAACTGATGGATTCGATGTATCACTAGCTTATCTGAAGACCATATTCTCTCACTCAGGGCCTTTTGATGGGGTCTTGGGATTTTCACAAGGGGCAGCAATGGCAGCCTCACTCTGTGCACAACGCGGAAGATTGGATGGTGAATTAGATTTCAGATTTGCAATTTTATGTTCTGGATTTGCTTTAAATTCAGGGGAGCTCAAGCTGGGATCAATCAACTGCCCTTCGCTTCATATCTTTGGGAATGGCCAAGGTAAAGACAGACAGATAGCATGCCACGCCAGCATGGAGCTTGCTGGATTATTTGAGCAGAGCTGTTCGGTGATCATTGAGCATGAATCAGGTCATATAATTCCTACTCAGTCTCCATATATCGATAGGATCAAAGCTTTTCTTATGCACTTTCTCTGA 1869 0.4259 MAEKKQEEEDGVLLYYKYASVPDLQELVSFYDSNCKSLGLLGRVRLAPDGVNVTVGGKLSSLVKHIAAVKLNNLFEGTDFKLASCHCPSNDRIAEECGFTSLSIRVVKELVTFSSHPLLKSPAISNAGRHLSAVEFHSVLQSAGNFTESEGSTCQKGLLLLDARNLYETRIGKFQTPNVETLDPEIRQYSDLPSWIDNHSEQLQGNCVLMYCTGGIRCEMASAYIRSKGANFDNVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRVSVGSSNADIVGSCILCGSSFDDYSSRCRCTYCRMLVLVCDNCQEKDGAIYVCELCQKHGKGGGPVPLIENSINQTKSTLVDGSGAVELESATSSDHTTSFPELPWRHGTGPPRKLRILCLHGFRQNASNFKGRTASLAKKLRNIAELVFIDAPHELPYIYRPRPTETSHSSVESQLQQSPPPLENCKKKFAWLVAQGFNNLRGTDWEIVDERFDPLQYQQQTDGFDVSLAYLKTIFSHSGPFDGVLGFSQGAAMAASLCAQRGRLDGELDFRFAILCSGFALNSGELKLGSINCPSLHIFGNGQGKDRQIACHASMELAGLFEQSCSVIIEHESGHIIPTQSPYIDRIKAFLMHFL* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01277 622 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 122 268 IPR036873 -
Eupl12g01277 622 Gene3D - 120 279 IPR036873 -
Eupl12g01277 622 Gene3D - 1 111 - -
Eupl12g01277 622 Pfam Rhodanase C-terminal 256 322 IPR022111 -
Eupl12g01277 622 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 118 282 - -
Eupl12g01277 622 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 621 IPR020936 -
Eupl12g01277 622 FunFam Rhodanese-like domain-containing protein 6 1 111 - -
Eupl12g01277 622 SMART rhod_4 132 251 IPR001763 -
Eupl12g01277 622 FunFam esterase OVCA2 isoform X6 377 622 - -
Eupl12g01277 622 Pfam Serine hydrolase (FSH1) 380 613 IPR005645 -
Eupl12g01277 622 SUPERFAMILY alpha/beta-Hydrolases 373 622 IPR029058 -
Eupl12g01277 622 ProSiteProfiles Rhodanese domain profile. 154 254 IPR001763 -
Eupl12g01277 622 Pfam UPF0176 acylphosphatase like domain 12 109 IPR040503 -
Eupl12g01277 622 Gene3D alpha/beta hydrolase 378 622 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01277 Eupl-Chr12 29447633 29462601 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01277 5 622 Sulfurtransferasese or Rhodanese AT1G09280 64.952 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01277 - - nnu:104605019 991.875