Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01275 ATGGGCGGGGATGGAGAGCAGCCTTTTATATTCCTGCTCAGAATTCATCCATCAATCATTGCTTCTCTTCTTCGACTCCAAAACACTCATCCGACAAGCTTTCTTCCTTTGCTGTCTTTGAGGGATTTCTTCAAACAGCGAGAGCGAAAGGGAGGGAGAGTTCGAGTGACAATGTCTCTTCGACCTACATCTCGAACTGAGGTTCGGAAGAAATCATACAAAACAGGCGTCGATGCAGACGAAGCTCGTCGAAGGAGAGAAGACAACCTCGTTGAGATCAGGAAGAACAAACGAGAAGACAATCTCCTCAAGAAACGTAGAGAAGGCCTTCTTCAGTCTCAACAATCTGCCGAGCCTTCTCAAGCCCCTCTTGGGATCGAGAAAAAGTTGGAAAGTCTTCCTGTGATGGTACAAGGAGTATGGTCTGATAATCCTGCTTTGCAATTGGAATCAACCACTCAGTTCAGGAAACTTCTATCAATTGAGCGCAATCCTCCAATTGAGGAGGTAATCAAAGCAGGTGTTGTCCCCCGGTTTGTGGAATTTCTTGGAAGGCATGATCTGCCTCAATTGCAATTTGAGGCAGCATGGGCTTTGACCAATATTGCATCTGGGACTTCAGAGCATACACGAGTTGTCATTGATCATGGTGCTGTCCCAAATTTTGTGCAACTTCTCAGTTCTTCAAGTGACGACGTCCGAGAACAGGCTGTATGGGCCTTGGGTAACGTAGCTGGTGATTCACCAAGCTGTAGGGATCTTGTTCTCAGTAATGGTGCACTCATGCCATTGCTGTCTCAGTTAAATGAACACTCAAAACTATCTATGCTAAGGAATGCTACATGGACATTATCTAACTTTTGCCGTGGCAAGCCACCGGCACCATTTGAGCAGGTGAAGCTTGCATTGCCAGCTCTTCAGCACCTTATTCACTCAACCGATGAAGAAGTCCTTACAGATGCTTGCTGGGCTCTGTCTTATCTTTCCGATGGCACTAATGACAAAATCCAAGCTGTGATTGAGGCTGGTGTCTGTCCACGACTTGTGGAGCTTCTCCTTCATACGTCACCTACGGTTCTTATACCTGCTCTTCGGACAGTGGGTAACATTGTTACCGGTGATGATGCTCAAACTCAGTTTGTGATCGACAACCAAGTGCTTCCTTGTCTCTATCAACTTCTCACACAAAATCACAAGAAAAGCATAAAGAAAGAAGCATGTTGGACGATCTCAAATATCACTGCTGGGAATAGAGGTCAGATACAGGCTGTTATTGATGCGAACATCATCTCACCACTTGTACAACTACTACAACATGCCGAGTTTGACATCAAGAAGGAGGCTGCATGGGCTATCTCCAATGCCACCTCTGGGGGATCCCACGAGCAGATTCAATATTTGGTGACACAAGGCTGCATCAAGCCACTGTGCGATCTTCTAGTCTGCCCAGATCCAAGGATCGTGACTGTATGCCTTGAGGGTCTCGAGAACATTCTGAAGGTGGGCGAATCTGATAAAGAGTTGGGAAAGAGCAATGGAATCAACATCTTTGCGCAAATAATTGATGAATGCGAAGGATTAGATAAGATTGAGAATCTGCAGAGTCATGACAATAATGAGATCTATGAGAAGGCTGTGAAGATCTTGGAGAGATACTGGGTCGAGGACGAAGAGGAAGAACAGAATCTTCAAGATGGTGGGGACGACACTCAGCAGGGCTTTGATTTTGGAACTAGCCAGCCCAATCTTCCCTCTGGTGGTTTCAAATTTGGCTGA 1776 0.4595 MGGDGEQPFIFLLRIHPSIIASLLRLQNTHPTSFLPLLSLRDFFKQRERKGGRVRVTMSLRPTSRTEVRKKSYKTGVDADEARRRREDNLVEIRKNKREDNLLKKRREGLLQSQQSAEPSQAPLGIEKKLESLPVMVQGVWSDNPALQLESTTQFRKLLSIERNPPIEEVIKAGVVPRFVEFLGRHDLPQLQFEAAWALTNIASGTSEHTRVVIDHGAVPNFVQLLSSSSDDVREQAVWALGNVAGDSPSCRDLVLSNGALMPLLSQLNEHSKLSMLRNATWTLSNFCRGKPPAPFEQVKLALPALQHLIHSTDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHTSPTVLIPALRTVGNIVTGDDAQTQFVIDNQVLPCLYQLLTQNHKKSIKKEACWTISNITAGNRGQIQAVIDANIISPLVQLLQHAEFDIKKEAAWAISNATSGGSHEQIQYLVTQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGESDKELGKSNGINIFAQIIDECEGLDKIENLQSHDNNEIYEKAVKILERYWVEDEEEEQNLQDGGDDTQQGFDFGTSQPNLPSGGFKFG* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01275 591 Gene3D - 131 554 IPR011989 -
Eupl12g01275 591 MobiDBLite consensus disorder prediction 558 591 - -
Eupl12g01275 591 Pfam Importin beta binding domain 69 153 IPR002652 GO:0006606|GO:0061608
Eupl12g01275 591 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 174 217 IPR000225 GO:0005515
Eupl12g01275 591 MobiDBLite consensus disorder prediction 62 81 - -
Eupl12g01275 591 FunFam Importin subunit alpha 68 107 - -
Eupl12g01275 591 SUPERFAMILY ARM repeat 69 559 IPR016024 -
Eupl12g01275 591 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 301 343 IPR000225 GO:0005515
Eupl12g01275 591 MobiDBLite consensus disorder prediction 566 585 - -
Eupl12g01275 591 Gene3D - 68 107 IPR036975 GO:0006606
Eupl12g01275 591 SMART arm_5 291 330 IPR000225 GO:0005515
Eupl12g01275 591 SMART arm_5 206 246 IPR000225 GO:0005515
Eupl12g01275 591 SMART arm_5 163 204 IPR000225 GO:0005515
Eupl12g01275 591 SMART arm_5 460 500 IPR000225 GO:0005515
Eupl12g01275 591 SMART arm_5 248 289 IPR000225 GO:0005515
Eupl12g01275 591 SMART arm_5 374 415 IPR000225 GO:0005515
Eupl12g01275 591 SMART arm_5 332 372 IPR000225 GO:0005515
Eupl12g01275 591 SMART arm_5 417 457 IPR000225 GO:0005515
Eupl12g01275 591 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 217 259 IPR000225 GO:0005515
Eupl12g01275 591 MobiDBLite consensus disorder prediction 64 81 - -
Eupl12g01275 591 ProSiteProfiles IBB domain profile. 53 115 IPR002652 GO:0006606|GO:0061608
Eupl12g01275 591 PANTHER IMPORTIN ALPHA 69 557 - -
Eupl12g01275 591 Pfam Atypical Arm repeat 515 563 IPR032413 -
Eupl12g01275 591 PIRSF Importin_alpha 59 590 IPR024931 GO:0005737|GO:0006606|GO:0061608
Eupl12g01275 591 FunFam Importin subunit alpha 131 554 - -
Eupl12g01275 591 Pfam Armadillo/beta-catenin-like repeat 164 204 IPR000225 GO:0005515
Eupl12g01275 591 Pfam Armadillo/beta-catenin-like repeat 302 329 IPR000225 GO:0005515
Eupl12g01275 591 Pfam Armadillo/beta-catenin-like repeat 374 415 IPR000225 GO:0005515
Eupl12g01275 591 Pfam Armadillo/beta-catenin-like repeat 333 371 IPR000225 GO:0005515
Eupl12g01275 591 Pfam Armadillo/beta-catenin-like repeat 417 456 IPR000225 GO:0005515
Eupl12g01275 591 Pfam Armadillo/beta-catenin-like repeat 207 245 IPR000225 GO:0005515
Eupl12g01275 591 Pfam Armadillo/beta-catenin-like repeat 461 498 IPR000225 GO:0005515
Eupl12g01275 591 Pfam Armadillo/beta-catenin-like repeat 248 289 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01275 Eupl-Chr12 29412143 29428172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01275 320 522 U-box Gene Family AT5G67340 21.951 7.66e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01275 K15042 - nnu:104605023 969.533