Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01255 ATGGGAGCTTCTCCACAACCCCCCCTCCTTGTTTCCCTTGATTTGAAGAGCATGGTCATAGAAAATAAGGGTATGTGTAAGTCTTCAAGTGATTCTCTTTGGATCAAGGTCTTGGCAGCTCAATCCATGAGAAGAAGGCAAGATAGGAGACTAAGGATCAAGAGGATTAATGGAGGACATGGGTGGAGTAGAAGAAGGTCTACAAGGATTTTGATGAAAAGGAGAGCCATTCTAGAAGGTTCTAGAAGGCCCATGAATGGAATGGAGAGGAGAGTTAAAACTCTAAAGAAGCTTGTGCCAAATGGGAAATCCATGGGCTTGGATGGGCTTTTCAGGGAGACAGCTGATTACATTATGTCTTTAGAAATGCAAGTGAAGGTTATGCAGATTATGTTCAAAGTATTGTCGGGTTCGGGTTCTAATGAGTGA 429 0.4289 MGASPQPPLLVSLDLKSMVIENKGMCKSSSDSLWIKVLAAQSMRRRQDRRLRIKRINGGHGWSRRRSTRILMKRRAILEGSRRPMNGMERRVKTLKKLVPNGKSMGLDGLFRETADYIMSLEMQVKVMQIMFKVLSGSGSNE* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01255 142 CDD bHLH_AtIBH1_like 77 131 IPR044549 GO:0006355
Eupl12g01255 142 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 38 135 IPR044660 GO:0006355
Eupl12g01255 142 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 72 121 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01255 Eupl-Chr12 29213900 29214328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01255 31 140 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 45.946 1.31e-24 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01255 - - vvi:100855136 141.354