Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01254 ATGGCATCTTCTCTCATCTCGAATCCCGAAACGAACTCCGACAGATCGCGAGAGTCGAAAAAGAAGAAGAAGAAGAAAAGCCAGAGCCAGAACCAAAAGCAAAACCAACCGACGAGATGGAAAACCGACGTCGAACAACAGATCTACTCCTCGAAACTTGTAGAAGCTATCCGTCAAGTTCGCCGGAATCAATTGACGACAGCTTCGGCTTCGGCTTCGGCTTCGGCTTCAAATTCACCGCCACGTGGTCGCGCCGTCCGTGAAGCTGCCGATCGAGCTCTAGCCGTCGCGGCTAAAGGACGAACGAGGTGGAGCCGAGCGATCCTCACGAACCGGCTTAAGTTGAAATTCAAGAAGAAGAAACCAAGAGTGGTGGTGCCCGACAACTGCCAGTCGAAGAAACCGAGAGTGAGTCTTCTTCGTTTAAAGGAAAAGAGATTCCCGGCGTTGCATCGGCGGGTGCGTGTTCTCGGACGTTTAGTTCCCGGTTGCCGGAAACTATCGTTTCCAGCGCTCCTAGAAGAAGCCACAGATTACATAGCTGCGCTGGAGATGCAGGTCAGAGCCATGACCTCTCTCCTCTCCGGTGCCGCGCCGGAAGACCGGCTAGACTCGAGTGGGCCCCCACCCCTAGCTAACCAGAGCCGCGTCTTTTGA 657 0.5434 MASSLISNPETNSDRSRESKKKKKKKSQSQNQKQNQPTRWKTDVEQQIYSSKLVEAIRQVRRNQLTTASASASASASNSPPRGRAVREAADRALAVAAKGRTRWSRAILTNRLKLKFKKKKPRVVVPDNCQSKKPRVSLLRLKEKRFPALHRRVRVLGRLVPGCRKLSFPALLEEATDYIAALEMQVRAMTSLLSGAAPEDRLDSSGPPPLANQSRVF* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01254 218 MobiDBLite consensus disorder prediction 66 88 - -
Eupl12g01254 218 MobiDBLite consensus disorder prediction 1 43 - -
Eupl12g01254 218 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 134 183 IPR011598 GO:0046983
Eupl12g01254 218 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 145 197 IPR036638 GO:0046983
Eupl12g01254 218 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 42 195 IPR044660 GO:0006355
Eupl12g01254 218 MobiDBLite consensus disorder prediction 199 218 - -
Eupl12g01254 218 MobiDBLite consensus disorder prediction 66 80 - -
Eupl12g01254 218 CDD bHLH_AtIBH1_like 139 194 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01254 Eupl-Chr12 29194283 29204929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01254 39 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 53.939 1.02e-49 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01254 - - nnu:104605038 220.32