Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01252 ATGGCGTCTGGTTCAGAAGAGGGATTAGGGTTTGGGACAGAAGATTTCGATCCATCAATCGCGGCGACGACGGAAGTTGAGCTCTTCAAGCGGGCATGGCGAAACGAAAAGGCTGCTCCGGAAATTCTTCAGTTTCAGGCCGGATTGGTTCAGAGATCGAGAGAACAGATCCAATTGATGGAAGATACCGTGGAGGAATATGGGGGAAACAGCACGGACCCACTCACTGTATCCCTTTACCAGATGGACTTGGACCGGACTCTGGTTCTCTTGAGATCGTATCTTGAAACCCGTCTCCAAAAGATTGAGAAGTATATGATCCACATTTCAAAAACTGAAATGTGGGACCGGCTTTCTGAACAAGAACAGAAGTTTGCTAAGAGGTGTACTGATCACTTGGAAAAGCATCTCCAACAATCTGTTCTGTCATGGTTGCCTCATGGTTATCAGTCCATTCTGAAGCAATCCATATCAAGTGAAGAGGATGACATGGGTACTGTATCTTCCTTACATGCTATGACCTAG 525 0.4629 MASGSEEGLGFGTEDFDPSIAATTEVELFKRAWRNEKAAPEILQFQAGLVQRSREQIQLMEDTVEEYGGNSTDPLTVSLYQMDLDRTLVLLRSYLETRLQKIEKYMIHISKTEMWDRLSEQEQKFAKRCTDHLEKHLQQSVLSWLPHGYQSILKQSISSEEDDMGTVSSLHAMT* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01252 174 CDD GINS_A_Sld5 26 142 IPR038749 -
Eupl12g01252 174 SUPERFAMILY GINS helical bundle-like 22 153 IPR036224 -
Eupl12g01252 174 Pfam GINS complex protein 51 122 IPR021151 -
Eupl12g01252 174 PANTHER SLD5 PROTEIN 18 164 IPR008591 GO:0006261
Eupl12g01252 174 FunFam DNA replication complex GINS protein SLD5 12 172 - -
Eupl12g01252 174 PIRSF GINS_Sld5 6 170 IPR008591 GO:0006261
Eupl12g01252 174 Gene3D - 13 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01252 Eupl-Chr12 29116546 29117808 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01252 1 174 Core DNA Replication Machinery Family AT5G49010 58.286 4.32e-65 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01252 K10735 - ming:122090932 266.929