Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01247 ATGCTTGGAGGTTTAATGGAACTCTTTTCTCTCTGTTGGAGGCCCTGTGGCGTCAATGCTGATGGTGGTGGTGGTGCAAGGGAAGGAAGAGAGGGTTTGCTTTGGTTTCGTGATATCGGCCGATATGCCTCCGGTGATTTCTCCATGGCTGTCGTGCAGGCCAACCAGGTGCTCGAGGACCAGTGCCAGATCGAATCTGGACCCTTCGGCACGTTTGTTGGTGTCTATGATGGTCATGGAGGTCCCGAGGCCGCTCGATACGTCTGCGATCACCTGTTCCGCCATTTTCAAGATATTTCAGCAGAGGACCAGGGTGTGACACCTGAGACCATCCAGAGAGCCTTTCTAGAAACAGAGAATGGGTTTACTGCCCTTGTTTCTGAGCTATGGAGAACTCAACCAAATATGGCAACCGTTGGAACGTGCTGTCTTGTTGGAGTGATCTGTCAGCAGACCCTCTATGTAGCAAATCTTGGCGATTCCCGTGTCGTACTGGGGAAAAAAGTTGGTAACACTGGGGGAATGGCTGCCATACAATTATCTAGTGAACACAATGCTAACATGGATGCTGTGAGGCAGGAACTTAAAGAATTACACCCAAATGACCCACAAATAGTTGTCCTCAAACATGGAGTTTGGAGAGTAAAAGGCATTATTCAGGTCTCTAGATCTATAGGTGACGTATATATGAAACATGCCCAGTATAACAGGGAACCGATCAGTGCGAAATTCAGACTTCCCGAACCAATGAGCATGCCCATCTTGACTGCCAATCCAGCTATTATCTCTATGCCCATTCAACCAAATGATTCATTCCTTATATTTGCCTCTGATGGTCTATGGGAGCACTTGAGCAATGAAAAAGCTGTGGATATTGTTAACAATCATCCACGTGCAGGAAGTGCTAAAAGACTCATCAAGGCTGCGCTTCTTGAAGCGGCTAGAAAACGAGAGATGCGGTACTCAGATCTTCAAAGGATCGGCAAGAAGGTCCGACGTCACTTCCATGATGACATAACAGTCATTGTTTTGTTCCTAAATCACGATCTTATCCCCAGAGGCCTGGTGGAAGGCCCTCCATTATCTATTCGAAGTGCTCTGGAACACTGA 1110 0.4739 MLGGLMELFSLCWRPCGVNADGGGGAREGREGLLWFRDIGRYASGDFSMAVVQANQVLEDQCQIESGPFGTFVGVYDGHGGPEAARYVCDHLFRHFQDISAEDQGVTPETIQRAFLETENGFTALVSELWRTQPNMATVGTCCLVGVICQQTLYVANLGDSRVVLGKKVGNTGGMAAIQLSSEHNANMDAVRQELKELHPNDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQYNREPISAKFRLPEPMSMPILTANPAIISMPIQPNDSFLIFASDGLWEHLSNEKAVDIVNNHPRAGSAKRLIKAALLEAARKREMRYSDLQRIGKKVRRHFHDDITVIVLFLNHDLIPRGLVEGPPLSIRSALEH* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01247 369 CDD PP2Cc 47 346 IPR001932 -
Eupl12g01247 369 SMART PP2C_4 33 344 IPR001932 -
Eupl12g01247 369 SUPERFAMILY PP2C-like 55 347 IPR036457 -
Eupl12g01247 369 PANTHER PROTEIN PHOSPHATASE 44 344 IPR015655 GO:0004722|GO:0006470
Eupl12g01247 369 Pfam Protein phosphatase 2C 71 317 IPR001932 -
Eupl12g01247 369 Gene3D - 39 352 IPR036457 -
Eupl12g01247 369 ProSiteProfiles PPM-type phosphatase domain profile. 46 346 IPR001932 -
Eupl12g01247 369 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Eupl12g01247 369 FunFam Probable protein phosphatase 2C 42 37 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01247 Eupl-Chr12 29067954 29076617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01247 1 366 PP2C-type Phosphatase Gene Family AT4G38520 58.511 1.27e-161 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01247 K01102 - nnu:104605034 624.009