Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01236 ATGGACAACACTCCACCAGCAGAAGAGCTGCTGAAGAAGATCCACGAGCTCGAAGCTGGGCACGCCCACCTCAAACTAGAGATGTCGAAGCTGATGCTCAGTAGTGGCGGCACCGGCACCGATCCCAAATTGGAACACGGGCATCAGCGGTCCCATTCAGTATCTCCTCAACGATCCAGGTTCGCCGCTCCAAGGAGAAAGGGCGGTGCGGGCCCCGACGGAGCTGCTGCTGCGTGGAAAAAGGGTTCGGCCTCATTCAGACATTCGTCACCGTTGCAGAGGGAGAGCAGGAGTCGTGACCCTTTGAGCCCCATAGGTGGAGGTGGGCCGGCGTCGGTGAATTTTACTGATGGCCAGTATTTGAATATCTTGCAGTCTATCGGTCAGTCCGTTCATATATTTGATCTCAACGGCCGGATTATTTACTGGAATCGAATGGCTGAGCACCTCTACGGTTATATCTCATCGGAAGCGCTTGGTCAGGATGCCATTGAGCTTCTTACAGATGCCCATGACTTCGATGTAGCTAATAATATAATACAACGTGTAACCATGGGGGAGAGCTGGACTGGACAGTTTCCAGTAAAGAATAAATTAGGGGAGCGATTTCTAGCAATTGCGACCGACACCCCATTCTACGATGATGACGGTATTTTGGTCGGGATTATTTGTGTATCGAGTGATTCACGATCCTTTCAAGAAATGCGCGTTCCATTGTCTGGTACAAAGCCCTTGGAAGCCACTTCCAGCTTTAGTCGGCCTAGAAGCAGTCCCGCAACTAAAACTGGTCTCGATCCTCAGCAACCTCTGCAAGTTGCGATTGCCACAAAATTATCAAATTTGGCTTCGAAGGTGACCAACAAAGTCAGGTCAAAGATACGAACTGGTGAGAACCGTATGGAACGTGAAAGTGGGAGTGGAGATAGCCAGTATTCTGATCAAGGCTTCTCGGATGCAGTTCTCTCTGACCATAGGGAGGATGCGAATTCGAGTGGAGCTAGCACGCCTAGAGGAGACTTACCCCCATCCCCCTTTGGTGTATTTTCTCAGGCTATTCCTGAGGAGAAATCCCCTGGAAAACCCTCCAGAGATTCTGGTGATGAGGGACAAGGGAAGACGGGGATCCACAAAATCACAACCTCAAAGGCAGAGACATGGATTGGTAAGAAGGGGATATCGTGGCCTTGGAAAGGGAATGAACAAGATGGGCCAGATGCAAGGACTACCCGCTGTGTCTGGCCTTGGTTGAGTCATGATCAAGAAAATGACTTGAGTCATCAGAAGAGTCCAGATTCTGGTGCAAAGTCAGAAAGCCAGATGGGGGAAACTAACCGACCAGGAAATAACGAGGCCTTGTGGTCCTGGTCCTCTTCATTTAATGTTAACAGCACAAGTAGCGTGAGCAGTAATGGGAGTACCAGTAGCAGTGCTGTTCATAAGGTGGATGTGGAAACTGACTGCTTGGATTACGAGATTTTGTGGGAAGACTTGACGATCGGGGAACAGATTGGGCAAGGCTCTTGTGGAACTGTATATCATGGTTTGTGGTATGGCTCGGATGTTGCAGTTAAGGTATTTTCCAAGCAAGAATATTCAGATGACGTACTACTTTCCTTCAGACAGGAGGTATCGCTTATGAAGAGGCTCCGGCATCCAAATGTACTACTTTTTATGGGGGCAGTAACTTCACCTCAGCGTCTTTGCATTGTTACAGAATTCCTCCCACGTGGAAGTTTGTTTCGGTTGCTTCAACGAAACACATCTCGACTAGATTGGAGACGGCGTGTTCACATGGCTTTGGATATTGCAAGGGGCGTGAATTATCTTCATCATTTCAACCCACCTGTTATCCATCGCGACTTGAAGTCATCAAATCTGCTAGTTGATAAAAACTGGACTGTGAAGGTTGGTGACTTTGGTCTCTCACGTCTCAAACATGACGCCTACCTGACAACAAAGACTGGGAAAGGAACGCCACAATGGATGGCTCCAGAGGTTCTACGTAACGAGCCTTGTGATGAGAAGTCTGATGTATACAGCTATGGGGTAATACTATGGGAGCTTGCCACGGAGAAGATTCCTTGGGATAACCTCAACTCAATGCAGGTGATTGGAGCTGTAGGATTCATGAACCAACGGCTTGAGATCCCGACAGACTTGAACCCGCAGTGGGTGTCAATAATCGAGAGCTGCTGGCACAGCGAGCCACAGTCCCGTCCCACATTCCAAGAACTTCTGGAAAGGTTTAAAGAAATGCAGAGACAGTATTCGATTCAATCCCAGGCAATTCGTTCAGCCCAAGGAGATACCATACAAAAGGCGCCCCTGATTTGA 2334 0.4871 MDNTPPAEELLKKIHELEAGHAHLKLEMSKLMLSSGGTGTDPKLEHGHQRSHSVSPQRSRFAAPRRKGGAGPDGAAAAWKKGSASFRHSSPLQRESRSRDPLSPIGGGGPASVNFTDGQYLNILQSIGQSVHIFDLNGRIIYWNRMAEHLYGYISSEALGQDAIELLTDAHDFDVANNIIQRVTMGESWTGQFPVKNKLGERFLAIATDTPFYDDDGILVGIICVSSDSRSFQEMRVPLSGTKPLEATSSFSRPRSSPATKTGLDPQQPLQVAIATKLSNLASKVTNKVRSKIRTGENRMERESGSGDSQYSDQGFSDAVLSDHREDANSSGASTPRGDLPPSPFGVFSQAIPEEKSPGKPSRDSGDEGQGKTGIHKITTSKAETWIGKKGISWPWKGNEQDGPDARTTRCVWPWLSHDQENDLSHQKSPDSGAKSESQMGETNRPGNNEALWSWSSSFNVNSTSSVSSNGSTSSSAVHKVDVETDCLDYEILWEDLTIGEQIGQGSCGTVYHGLWYGSDVAVKVFSKQEYSDDVLLSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTSRLDWRRRVHMALDIARGVNYLHHFNPPVIHRDLKSSNLLVDKNWTVKVGDFGLSRLKHDAYLTTKTGKGTPQWMAPEVLRNEPCDEKSDVYSYGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPTDLNPQWVSIIESCWHSEPQSRPTFQELLERFKEMQRQYSIQSQAIRSAQGDTIQKAPLI* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01236 777 MobiDBLite consensus disorder prediction 290 306 - -
Eupl12g01236 777 SUPERFAMILY Protein kinase-like (PK-like) 480 747 IPR011009 -
Eupl12g01236 777 SMART serkin_6 497 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g01236 777 ProSiteProfiles PAS repeat profile. 116 187 IPR000014 -
Eupl12g01236 777 MobiDBLite consensus disorder prediction 243 268 - -
Eupl12g01236 777 Gene3D Transferase(Phosphotransferase) domain 1 575 775 - -
Eupl12g01236 777 ProSiteProfiles Protein kinase domain profile. 497 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g01236 777 Gene3D PAS domain 128 234 - -
Eupl12g01236 777 Coils Coil 7 27 - -
Eupl12g01236 777 FunFam PAS domain-containing protein tyrosine kinase 490 574 - -
Eupl12g01236 777 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 247 755 - -
Eupl12g01236 777 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Eupl12g01236 777 Gene3D Phosphorylase Kinase; domain 1 490 574 - -
Eupl12g01236 777 MobiDBLite consensus disorder prediction 289 384 - -
Eupl12g01236 777 CDD STKc_MAP3K-like 503 749 - -
Eupl12g01236 777 MobiDBLite consensus disorder prediction 357 371 - -
Eupl12g01236 777 SUPERFAMILY PYP-like sensor domain (PAS domain) 120 228 IPR035965 -
Eupl12g01236 777 CDD PAS 127 228 IPR000014 -
Eupl12g01236 777 SMART pas_2 118 184 IPR000014 -
Eupl12g01236 777 PRINTS Tyrosine kinase catalytic domain signature 571 584 IPR001245 GO:0004672|GO:0006468
Eupl12g01236 777 PRINTS Tyrosine kinase catalytic domain signature 676 698 IPR001245 GO:0004672|GO:0006468
Eupl12g01236 777 PRINTS Tyrosine kinase catalytic domain signature 610 628 IPR001245 GO:0004672|GO:0006468
Eupl12g01236 777 PRINTS Tyrosine kinase catalytic domain signature 657 667 IPR001245 GO:0004672|GO:0006468
Eupl12g01236 777 PRINTS Tyrosine kinase catalytic domain signature 720 742 IPR001245 GO:0004672|GO:0006468
Eupl12g01236 777 Pfam PAS fold 119 226 IPR013767 GO:0006355
Eupl12g01236 777 NCBIfam PAS domain S-box protein 120 228 IPR000014 -
Eupl12g01236 777 FunFam PAS domain-containing protein tyrosine kinase family protein 575 766 - -
Eupl12g01236 777 MobiDBLite consensus disorder prediction 419 451 - -
Eupl12g01236 777 MobiDBLite consensus disorder prediction 431 451 - -
Eupl12g01236 777 MobiDBLite consensus disorder prediction 30 109 - -
Eupl12g01236 777 Pfam Protein tyrosine and serine/threonine kinase 497 748 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01236 Eupl-Chr12 28965645 28980108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01236 1 769 MAP Kinase Kinase Kinase AT3G06620 61.626 0.0 952
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Eupl12g01236 PK_Tyr_Ser-Thr 1.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01236 - - ming:122092420 1179.85