Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01229 ATGGCGAGGATCAAACCTCAAACGCTGCTACTCCAGAGCAAAAAGAAGAAGGGTCCAACTCGTATTAGTGTCTCAACTATTCTTATGTGCAACTTAGTTGTTGTCTTGATTGTGTTGTCCTTAGTTGCGACTTACAGGCATTGGTCTCAAAGGTCAAGAACCCAAGCAGAGAATGCCTTGTCAAATCTTGAGGAGGTTGACTCTTTCGTGGATTTGAAGAAATATGATCTTCCTAGTTATGCAATTCTAAACACCTCCAAAGGTTCAATAACAGTGGAGCTTTTCAAGGAAGGTTCTCCTGAGATTGTGGATAAATTTCTTGACTGGTGTCAAAAGGGGCACTTCAAGGGAATGCCTTTTCACCGTGTAATAAAAAACTATGTGATTCAAGGAGGGGATTTCCATAGACTTGGAGCTGCAGAAGATTGGACGTTGAAAGGAAAGCCTCACAGTCAACTTGTGACGAGCCCGAAGCACGAGGCATTTATGCTTGGAACTTCAAAGGCTAAACAGGATAGTAAAGGATTTGAGCTTTTTATTACGACTGCACCAATCCCAGATTTAAATGATAAGCTTATTGTGTTTGGACGAGTCATCAAGGGAGAGGATGTTGTTCAGGAAATCGAAGAGGTGGATACAGATGAACACTACCGACCTAAATCCCCTATAGGGATCATCAACGTGATTTTGAAACGGGAGCCTTGA 705 0.4227 MARIKPQTLLLQSKKKKGPTRISVSTILMCNLVVVLIVLSLVATYRHWSQRSRTQAENALSNLEEVDSFVDLKKYDLPSYAILNTSKGSITVELFKEGSPEIVDKFLDWCQKGHFKGMPFHRVIKNYVIQGGDFHRLGAAEDWTLKGKPHSQLVTSPKHEAFMLGTSKAKQDSKGFELFITTAPIPDLNDKLIVFGRVIKGEDVVQEIEEVDTDEHYRPKSPIGIINVILKREP* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01229 234 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 82 228 IPR002130 GO:0000413|GO:0003755
Eupl12g01229 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 190 205 IPR002130 GO:0000413|GO:0003755
Eupl12g01229 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Eupl12g01229 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 177 189 IPR002130 GO:0000413|GO:0003755
Eupl12g01229 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Eupl12g01229 234 CDD cyclophilin 82 227 - -
Eupl12g01229 234 FunFam Peptidyl-prolyl cis-trans isomerase 67 234 - -
Eupl12g01229 234 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 77 230 IPR002130 GO:0000413|GO:0003755
Eupl12g01229 234 Gene3D - 67 234 IPR029000 -
Eupl12g01229 234 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 233 - -
Eupl12g01229 234 SUPERFAMILY Cyclophilin-like 73 230 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01229 Eupl-Chr12 28803719 28816280 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01229 80 226 U-box Gene Family AT5G67530 30.464 1.94e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01229 - - nnu:104598767 383.259