Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01224 ATGGCGTTTTGGTGGCCTCTGCTCGTTCTCGGTTTCGCTTTCGCGATCTGTAGATTCTTGTTGATGCTCATACCTCCCAACGTACCTTCCATCGATGTCGATGCTTCCGATGTGCTGGATGATGGAAGTCAAGCTAAGGAGAACTGCATTTATATACCAAGTAGGGGAAGGGCAGTGCAATCAGACAGAGTTCAGTGTTATGAGCCTGCGACAATGAACTATTTGGGATTTTTCCCTGCATTGAAGCTTGATGAGGTCAAGGAGCATGTGGCCCAGGCCAGGGAGGCACAAAAGATATGGGCAAAGAGTAGCTTCAAGCAAAGACGTCAGTTTCTGCGGATACTTCTGAAGTATATTATCGAACATCAAGAGCTTATATGCGAGATGTCTTGTAGGGATACTGGAAAGACAATGGTAGATGCATCTTTGGGAGAGATAATGACGACATGTGAGAAGATCACTTGGCTTGTTGCGGAGGGTGAGCGGTGGCTAAAGCCTGAATATAGGTCATCTGGAAGGTCAATGCTGCACAAGAAATCAAAAGTGGAATTTTATCCCCTTGGAGTGATAGGCGCCATTGTCTCATGGAATTATCCGTTCCATAACATTTTTAATCCAATGCTAGCAGCAGTCTTTTCAGGAAATGGTGTTGTGATAAAGGTTTCAGAACACGCAAGTTGGTCCGGCTGTTTCTATTTCCGAATCATTCAATCAGCTCTTGCTGCCGTAGGAGCTCCTGATAATCTGGTCCATGTAATAACAGGATTTGCTGAGACAGGAGAAGCACTTGTGTCTTCAGTTGACAAAATCATTTTTGTTGGATCACCTGGTGTGGGTAAGATGATCATGAGAAACGCTGCTGACACATTAATTCCAGTCACCCTTGAGCTTGGTGGAAAAGATGCATTTATTGTGTGTGAAGATGTAGATGTGCCTCAAGTCGCTCAAATTGCTGTTAGGGCTGCTCTTCAATCAAGTGGGCAGAACTGTGCTGGTGCTGAGAGATTTTATGTTCACCGGGATGTTTATTCTTCATTTGTTGCTCAAGTAGTGAAAACCGTTAAATCTGTTCGCGTTGGTCCTCCACTGGCTGGAAAGTATGACATGGGAGCAATATGTTTGCAAGGGCATGCTGAGAGGCTTCAAAGCCTTATGAATGATGCCTTAGATAAAGGGGCAGAAATTGCCGGTCGAGGACTTTTTGGCAATTTGGGTGAAGATGCAATTGATCAGTTCTTTCCACCAACTGTACTAGTAAATGTTAACCACACAATGAAGTTGATGCAAGAAGAGGCTTTTGGACCAATCATGCCAATAATGAAGTTCAGTTCTGATGAAGAAGCTATTAAGCTTGCAAATGACACAAACTTTGGACTTGGTTGTGCTGTATTTTCTGGCAATCAACGCCGTGCAAAAGAAATAGCTTCCCAGTTACACTGTGGAGTTGCTGCAATCAATGACTTTGCATCAAACTACATGTGTCAGTCCCTGCCATTTGGTGGGGTGAAACACAGTGGATTTGGAAGATTTGCTGGCATAGAAGGATTGCGTGCTTGTTGTCTTGTGAAATCCGTTGTGGAGGATAGATGGTGGCCATTCATCAAGACAAAGATACCGAAGCCAATTCAGTACCCCGTTGCAGATAATTGCTTTGAGTTTCAAGAGTCACTTGTTGAATTACTATATGGATTGAACATATGGGATCGGTTGCGATCGTTGATTAATGTCTTAAAGATGCTCTCGGAGCAGAACTCTCCTGCAACCAGTGTTAGAAGAAACCAATGA 1785 0.4381 MAFWWPLLVLGFAFAICRFLLMLIPPNVPSIDVDASDVLDDGSQAKENCIYIPSRGRAVQSDRVQCYEPATMNYLGFFPALKLDEVKEHVAQAREAQKIWAKSSFKQRRQFLRILLKYIIEHQELICEMSCRDTGKTMVDASLGEIMTTCEKITWLVAEGERWLKPEYRSSGRSMLHKKSKVEFYPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGVVIKVSEHASWSGCFYFRIIQSALAAVGAPDNLVHVITGFAETGEALVSSVDKIIFVGSPGVGKMIMRNAADTLIPVTLELGGKDAFIVCEDVDVPQVAQIAVRAALQSSGQNCAGAERFYVHRDVYSSFVAQVVKTVKSVRVGPPLAGKYDMGAICLQGHAERLQSLMNDALDKGAEIAGRGLFGNLGEDAIDQFFPPTVLVNVNHTMKLMQEEAFGPIMPIMKFSSDEEAIKLANDTNFGLGCAVFSGNQRRAKEIASQLHCGVAAINDFASNYMCQSLPFGGVKHSGFGRFAGIEGLRACCLVKSVVEDRWWPFIKTKIPKPIQYPVADNCFEFQESLVELLYGLNIWDRLRSLINVLKMLSEQNSPATSVRRNQ* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01224 594 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 63 523 IPR016162 GO:0016491
Eupl12g01224 594 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 58 525 - -
Eupl12g01224 594 SUPERFAMILY ALDH-like 51 527 IPR016161 GO:0016491
Eupl12g01224 594 FunFam Aldehyde dehydrogenase A 299 493 - -
Eupl12g01224 594 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 295 302 IPR029510 GO:0016491
Eupl12g01224 594 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 323 334 IPR016160 GO:0016491
Eupl12g01224 594 FunFam aldehyde dehydrogenase 22A1 63 315 - -
Eupl12g01224 594 Pfam Aldehyde dehydrogenase family 60 525 IPR015590 GO:0016491
Eupl12g01224 594 CDD ALDH_F15-22 67 529 - -
Eupl12g01224 594 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 303 498 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01224 Eupl-Chr12 28768401 28778047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01224 1 594 Aldehyde Dehydrogenase Gene Family AT3G66658 80.537 0.0 1019
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01224 - - nnu:104605062 1104.74