Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01222 ATGGTGAACACTGGTCCCAACACCAACGGGTCTCAGTTCTTCATCTGTATTGCTAAGGCTAAGTGGCTGGACGGGAAACACGTCGTGTTTGGGCAAATTGTTGAAGGGGTGGATGTCTTGAAGGCGATCGCGCGAGAAGGTCAGATCTTCGTTTGGATGGACTTCCAAGTCTGTTGTCATCACTCATTGTGGCCTACTTTCTTAAAGAGGTTTGCTTATGTGAGGCAGGAGGACCTTTTCTTCTTGCAGCTGGCGGTGCATGACACACTATCTCTTGCTGCTGATCTTCAACTCCCCCACATATCTTTGGTGGAAGAGGGAGACGAATACGTCAACAACCTTATGTTTCGATTGGGCCTGGAAAGACTAACTTTTTGA 378 0.4788 MVNTGPNTNGSQFFICIAKAKWLDGKHVVFGQIVEGVDVLKAIAREGQIFVWMDFQVCCHHSLWPTFLKRFAYVRQEDLFFLQLAVHDTLSLAADLQLPHISLVEEGDEYVNNLMFRLGLERLTF* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01222 125 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 12 24 IPR002130 GO:0000413|GO:0003755
Eupl12g01222 125 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 25 40 IPR002130 GO:0000413|GO:0003755
Eupl12g01222 125 Gene3D - 1 49 IPR029000 -
Eupl12g01222 125 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 46 - -
Eupl12g01222 125 SUPERFAMILY Cyclophilin-like 1 46 IPR029000 -
Eupl12g01222 125 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 45 IPR002130 GO:0000413|GO:0003755
Eupl12g01222 125 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 45 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01222 Eupl-Chr12 28702515 28703134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01222 1 43 U-box Gene Family AT5G67530 51.163 1.61e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01222 K01802 K03767 han:110920661 82.8037