Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01221 ATGCTCTTAGAGTTCGTTCAGGTTCAAGTTCTTATTGTTTCTACGCTCTTGTACAGAGCGATCTCGTCGACGGTTCTTAAAATTTACACAGATCTGAAGTGTTTTACAACGTCGGCGATATCGGATTTCGCGGTTTCGCTCTCGAATTTTGACGGACAATTGAAAATGGTTCAATGGTTATTTCTGGAATATTTGCTCGTTTTCTCTTATATGGCATTCAATGTAGTAGCCGAATTGCCCAACTTTTTACTAGAAGCACCTTTGTTGTCTCCCTCCGGCATGCCATTCGCCACACCTGCTATTCCTGATCTTCCCCTGCCCGCAAATCTTCCATTGTTTCATCGACTACAGAGGAAGCATTTTTCGCCACATGGTGCACCATCACCTGTACTAGTTCCAGCTCAGCCTCCGGATTATGGCTCGTTGACAACTTCAGGTGACCCTCCATCAAGTTCAGGCTTGTCGAAACCATTGATTGAGAGGAGCCAATTACCAGCTCCCAGTGCAGGCCTTCTACCTCCCCGCTTGGCAGGTGTTGCCCCGACCCATTCCAACGTCGGTACATATCCTTCTGGTTTACCTCAGCCACCATTGTCCCCTGGCATCTCTGACTGTTGTGAACCGGATATGGTGCTGAAACGAGGGACTCGGGCTTGCCATTGTGTGTATCCAATAAAGCTTGATCTACTCCTTCTAAATGTGTCACTCAGCTCGAATTGGAGTCCTTTTCTGGAAGAATTAGCTTCTCAGCTTGGGCTGCGAGTTTCTCAGTTCGAGATCATCAACTTTTACGTACTCAGCTTATCAAGGCTGAATATTTCAATGGATATTACTCCACATACAGGGATCAGTTTCTCTGCCATTGATGTAAATACGATAAATTCTTCACTTGCCATGCATAGGATTCATCTTGACCCTGCGTTAGTGGGTGACTACAAACTTCTTAATTTGACCTGGTTCAAGCCCCCTGCTCCTTCTCAAGCTCCTGCTGCAGCTATGTCACCTATTGGTGCCCGACCTCATTTGCCCTCTCCTTCCACCCCACTCATTGCTGATAACAAGGGGAAACGTACAAACGTGATTCTTATTCTCGGTATTGTTGCTGGTATCCTATTCATCGTCATTATATCTGTGCTACTAATTTGTTCATGCACAACCGGTCAAGGAAAGAAGACTGTGACCGCCAAAGAAACTGCGAAGCCAAGGACTGCTGAGGCAGCTACCATAGGTGGGTCTCTTCCCCACCCTACCAGTACCCGATTTCTTGCATTCGAAGAGCTTAAAGAAGCAACAAATAACTTTGAACCTGCAAGCATGCTTGGAGAGGGTGGGTTTGGCAGGGTTTTTAAGGGTGTCTTAAGTGATGGCACAGCTGTCGCCATTAAGAAGCTTACTGGCGGAGGACAACAAGGTGGTAAAGAGTTCTTGGTTGAGGTCGAGATGCTTAGTAGGCTGCATCACCGTAATCTTGTGAAACTTGTGGGTTACTACAGCAGTAGCGACGCTTCACAGAACCTTCTTTGTTATGAGCTTGTCCCAAACGGAAGCTTAGAGGCCTGGCTCCATGGTCCCTTGGGATTAAATTGTCCTTTGGATTGGGACACTAGAATGAAGATTGCCCTTGATGCTGCTAGAGGACTTGCCTACCTACACGAGGACTCCCAACCCTGTGTTATCCACAGGGATTTCAAGGCATCCAATATATTACTCGAAAATAACTTTCATGCTAAAGTTGCCGATTTTGGCCTGGCCAAACAGGCACCTGAAGGCCAGGCAAATTATCTGTCTACTCGTGTGATGGGAACATTTGGGTATGTAGCGCCTGAGTATGCCATGACTGGACATCTACTAGTAAAAAGTGATGTATATAGCTATGGGGTTGTCCTCCTTGAGTTACTGACTGGAAGGAAGCCTGTAGATATGTCACAACCTTCTGGCCAGGAGAACCTTGTAACTTGGGCCAGGCCAATTCTAAGAGATAAAGAACGGTTAGAGGAGCTTGCTGATCCAAGGCTTGCCGGCAAGTACCCAAAGGACGATTTTGTACGTGTTTGCACAATTGCAGCAGCTTGTGTTGCTCCTGAGGCAAGCCAGCGGCCCACAATGGGAGAAGTGGTGCAATCCCTGAAGATGGTGCAGCGCATCACAGAGTATCAGGATTCCATGTTAACCACCTCCAGCACGCGTCCCAACCTCAGGCAGTCCTCCACTACCTACGAGTCAGATGGGACTTCGTCAATGTTCTCCTCCGGCCCTTTCTCTGGTCTAAGCGCCTTTGACAATGACAACATCTCTCGAACAGCAGTGTTCTCGGAAGACCTGCATGAAGGACGATGA 2337 0.4745 MLLEFVQVQVLIVSTLLYRAISSTVLKIYTDLKCFTTSAISDFAVSLSNFDGQLKMVQWLFLEYLLVFSYMAFNVVAELPNFLLEAPLLSPSGMPFATPAIPDLPLPANLPLFHRLQRKHFSPHGAPSPVLVPAQPPDYGSLTTSGDPPSSSGLSKPLIERSQLPAPSAGLLPPRLAGVAPTHSNVGTYPSGLPQPPLSPGISDCCEPDMVLKRGTRACHCVYPIKLDLLLLNVSLSSNWSPFLEELASQLGLRVSQFEIINFYVLSLSRLNISMDITPHTGISFSAIDVNTINSSLAMHRIHLDPALVGDYKLLNLTWFKPPAPSQAPAAAMSPIGARPHLPSPSTPLIADNKGKRTNVILILGIVAGILFIVIISVLLICSCTTGQGKKTVTAKETAKPRTAEAATIGGSLPHPTSTRFLAFEELKEATNNFEPASMLGEGGFGRVFKGVLSDGTAVAIKKLTGGGQQGGKEFLVEVEMLSRLHHRNLVKLVGYYSSSDASQNLLCYELVPNGSLEAWLHGPLGLNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGQANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKERLEELADPRLAGKYPKDDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRITEYQDSMLTTSSTRPNLRQSSTTYESDGTSSMFSSGPFSGLSAFDNDNISRTAVFSEDLHEGR* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01221 778 MobiDBLite consensus disorder prediction 722 746 - -
Eupl12g01221 778 FunFam Receptor-like serine/threonine-protein kinase ALE2 512 728 - -
Eupl12g01221 778 Gene3D Phosphorylase Kinase; domain 1 416 511 - -
Eupl12g01221 778 MobiDBLite consensus disorder prediction 132 157 - -
Eupl12g01221 778 PANTHER OS01G0750732 PROTEIN 202 731 - -
Eupl12g01221 778 Pfam Protein tyrosine and serine/threonine kinase 438 709 IPR001245 GO:0004672|GO:0006468
Eupl12g01221 778 ProSitePatterns Serine/Threonine protein kinases active-site signature. 558 570 IPR008271 GO:0004672|GO:0006468
Eupl12g01221 778 ProSitePatterns Protein kinases ATP-binding region signature. 440 463 IPR017441 GO:0005524
Eupl12g01221 778 FunFam Receptor-like serine/threonine-protein kinase ALE2 414 511 - -
Eupl12g01221 778 ProSiteProfiles Protein kinase domain profile. 434 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g01221 778 CDD STKc_IRAK 440 710 - -
Eupl12g01221 778 MobiDBLite consensus disorder prediction 138 157 - -
Eupl12g01221 778 Gene3D Transferase(Phosphotransferase) domain 1 512 731 - -
Eupl12g01221 778 SUPERFAMILY Protein kinase-like (PK-like) 413 711 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01221 Eupl-Chr12 28629211 28645310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01221 66 778 Receptor kinase-like Gene Family AT4G02010 68.811 0.0 983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Eupl12g01221 PK_Tyr_Ser-Thr 4.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01221 - - nnu:104598769 1160.98