Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01219 ATGGAATCTAACAGTCATATAAAACTCATCATCTCTCTCTCCTCTCTTCTCTTCTTCTACTCTGCACAGGCCATATGCATGCCTCGCAATGTCACGTCCCCCGTGCACTCCTCGCATCTGAATTCACCCGCACAACCACAGCCGGTGCACTTTCCTCCTCCAGTCTTGAACCCACCACCACCGCAGCCGGTGTCTTCCAATCCTCCAGTCTCATCATCACCATCAAAACCCACTCCTAATATTGCCATTAAAACCATATGCATCAGCACTGACCACCCTGAGCTTTGCATGTCCTCCATCCTTCCCTATCTAACCAGCAAGATCGATCCTGTTGCCGTCCTTGAAATGGAAATTAAGGCCTGCTTTCACAGCGTACAGGCTGCATTTGCCACGGCCATGACGATTGCTGCAGACCCCTCAACCCCGTCCGACACGGCTGCTGACATCGATGTATGCAAGGAGAGTTATAGTGATGCACTTGACAACCTCCAGAGTGCAACGGATGCTATCCCTACTCATGACATGGGCACACTGAATATCATGCTTAGCGCGGCCTTAACGGATTTTGAAACTTGCAAGGATGCGTTCGTTGAGACGCCGGGGGTGAATTCACCCTTTTCTAAATTCGATGACTTGCTTAGTAAGCTGGCTAGCAACTGCCTAGCCATTGCTTCCTTGATCAATTGA 687 0.4993 MESNSHIKLIISLSSLLFFYSAQAICMPRNVTSPVHSSHLNSPAQPQPVHFPPPVLNPPPPQPVSSNPPVSSSPSKPTPNIAIKTICISTDHPELCMSSILPYLTSKIDPVAVLEMEIKACFHSVQAAFATAMTIAADPSTPSDTAADIDVCKESYSDALDNLQSATDAIPTHDMGTLNIMLSAALTDFETCKDAFVETPGVNSPFSKFDDLLSKLASNCLAIASLIN* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01219 228 Pfam Plant invertase/pectin methylesterase inhibitor 83 223 IPR006501 GO:0004857
Eupl12g01219 228 NCBIfam pectinesterase inhibitor domain 69 224 IPR006501 GO:0004857
Eupl12g01219 228 MobiDBLite consensus disorder prediction 46 75 - -
Eupl12g01219 228 FunFam Invertase/pectin methylesterase inhibitor family protein 80 227 - -
Eupl12g01219 228 CDD PMEI-like_2 82 227 - -
Eupl12g01219 228 SMART PMEI_2 78 223 IPR006501 GO:0004857
Eupl12g01219 228 PANTHER PECTINESTERASE INHIBITOR-LIKE 22 223 - -
Eupl12g01219 228 MobiDBLite consensus disorder prediction 36 77 - -
Eupl12g01219 228 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 83 227 IPR035513 -
Eupl12g01219 228 Gene3D Invertase/pectin methylesterase inhibitor family protein 80 227 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01219 Eupl-Chr12 28621620 28623028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01219 77 227 Carbohydrate Esterase AT5G49180 25.153 4.31e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01219 - - vvi:104879796 166.007