Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01212 ATGAAAGAAGACAGTGAGGTTAAAGCAAGCTACCCACAGAGAGGAGGAGAAAAAGTAGAAGTAGAAGAAGAAGAAAAAGAAACACTTAAAAGATCAAGAATGGGAGGTTCTTCCTCTGCAAGTACAGATTCAAGGTCTTCAAGAGAACCCAAGATAGAAAATCAAGCCTCCAAAAAAAGGAAAGTGGTTGAGAAGACTGTGGTGACAGTGAGGATTGAAGCAAATGTTGGGAAGGAGAAGAGTGAAGGGCCACCTTCTGATTTCTGGTCTTGGAGGAAATATGGACAAAAACCCATCAAAGGATCTCCTTATCCAAGGGGCTATTACAGGTGCAGCACATCAAAGGGGTGTTCAGCCAAAAAGCAAGTTGAAAGATGCAGAACAAATGCTTCAATGCTCATCATCACCTATACATCAAGTCATAATCATCCAGGCCCTGATCTCCACACCAACAACCTAACCCAAGAACAACCACCACCACCACCTGAAACCCAACCCACCACTCCAAAACAACCACCCATTGAAAAAGAAGTCAATGAAGATCATCATCTCCACTACTTTCAATCACCCATCAATTACCCACAAGAAATCATCAACCAGCAAGAAGAAGAAAACCCATTAACATTAACAGTACTAGAGAAAACCCATGATCACACATTAAGTCTCATCTTTGATGAAGAACCACTCTCTTACCCTCATCTCATGACCTTCTCAACACCCAAATCAAAAGAAAATGATTTCTTTGATGAACTTGAAGAACTACCCACTTCTTCATATTTTACAAGCTTTATGAGGAGCAATTTCTTTGATGAAAGGATCCTTGTTCTTCCCTCTTAG 837 0.4074 MKEDSEVKASYPQRGGEKVEVEEEEKETLKRSRMGGSSSASTDSRSSREPKIENQASKKRKVVEKTVVTVRIEANVGKEKSEGPPSDFWSWRKYGQKPIKGSPYPRGYYRCSTSKGCSAKKQVERCRTNASMLIITYTSSHNHPGPDLHTNNLTQEQPPPPPETQPTTPKQPPIEKEVNEDHHLHYFQSPINYPQEIINQQEEENPLTLTVLEKTHDHTLSLIFDEEPLSYPHLMTFSTPKSKENDFFDELEELPTSSYFTSFMRSNFFDERILVLPS* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01212 278 Gene3D WRKY domain 70 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl12g01212 278 SMART WRKY_cls 85 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl12g01212 278 MobiDBLite consensus disorder prediction 138 154 - -
Eupl12g01212 278 MobiDBLite consensus disorder prediction 1 32 - -
Eupl12g01212 278 SUPERFAMILY WRKY DNA-binding domain 83 146 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl12g01212 278 MobiDBLite consensus disorder prediction 1 66 - -
Eupl12g01212 278 FunFam WRKY transcription factor 65 58 146 - -
Eupl12g01212 278 Pfam WRKY DNA -binding domain 87 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl12g01212 278 ProSiteProfiles WRKY domain profile. 80 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl12g01212 278 MobiDBLite consensus disorder prediction 138 175 - -
Eupl12g01212 278 MobiDBLite consensus disorder prediction 155 169 - -
Eupl12g01212 278 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 36 260 IPR044810 GO:0003700
Eupl12g01212 278 MobiDBLite consensus disorder prediction 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01212 Eupl-Chr12 28558843 28560977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01212 37 275 WRKY Transcription Factor Family AT4G01250 38.075 2.32e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl12g01212 WRKY 4.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01212 - - vvi:100262306 306.99