Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01203 ATGTCTTCCGTGCAACAAGTAAGCTCGGGATCGGAAGGAGACCCACAATACGTGATGGTCGATGACAGGAAGAAGAGAAGGATGCTCTCAAACAGAGAATCCGCGAGGCGGTCGAGGATGAGGAAGCAGAAGCACTTGGATGATCTGATAAACCAAATAGCCCAGCTGCAAAAAGAAAACAATGAGATCGTGCAGCGAGTTAATGCCACCACACAGCTGTACCACAAGTTTGAATCAGAGAACAACATATTGAGGGCTCAGGTGATGGAATTGAGCGATAGATTGCAGTCTTTGAACTCTGTCCTCCATATTGTGGAGGAAGTTAGTGGGTTTGTCATGGACATCCCTGAAATACCGGATCCTCTGCTGAAACCATGGCAGCTCCCTTGCCCATCCCAGCCGATCATGGCTTCTGCAAACATGTTTCAGTTTTGA 435 0.4782 MSSVQQVSSGSEGDPQYVMVDDRKKRRMLSNRESARRSRMRKQKHLDDLINQIAQLQKENNEIVQRVNATTQLYHKFESENNILRAQVMELSDRLQSLNSVLHIVEEVSGFVMDIPEIPDPLLKPWQLPCPSQPIMASANMFQF* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01203 144 Coils Coil 39 101 - -
Eupl12g01203 144 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
Eupl12g01203 144 CDD bZIP_plant_GBF1 24 75 IPR045314 GO:0003700|GO:0006355
Eupl12g01203 144 SUPERFAMILY Leucine zipper domain 23 77 IPR046347 GO:0003700|GO:0006355
Eupl12g01203 144 FunFam BZIP transcription factor 21 72 - -
Eupl12g01203 144 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 84 IPR004827 GO:0003700|GO:0006355
Eupl12g01203 144 Pfam bZIP transcription factor 23 81 IPR004827 GO:0003700|GO:0006355
Eupl12g01203 144 MobiDBLite consensus disorder prediction 1 44 - -
Eupl12g01203 144 MobiDBLite consensus disorder prediction 17 44 - -
Eupl12g01203 144 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
Eupl12g01203 144 Gene3D - 22 77 - -
Eupl12g01203 144 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01203 Eupl-Chr12 28508143 28510491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01203 1 142 bZIP Transcription Factor Family AT3G62420 58.333 5.20e-57 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl12g01203 bZIP_1 3.2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01203 K25786 - psom:113358142 231.876