Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01201 ATGGGATCTTCTGTGGTAACACCTGAAGATGTTTTGGAGTCGCTGATGAACGATGGTACCATCGATGCTATTAGATTGAAAATAATCAATCAGCTAAAAGCCAACGAGGAGCTTAAGAATAACACAATCACAATGGTGGAGCAGAGTAAAGTTCTTAACACCCCTGGTGCAGAGAAACAGACCAAGAGGGAGCTGTTTGACGCACTTCGGCAGGAGCTCGAAACGCCAGTACTTGAGAAGGCCTCTAAATCAGTTTGGGAGTTGATTCTGGACAATGATGGGTTAGGGAAAGAAATAAGTGAAACTGTTGAAAGAGTCTTCTATCGATTAAGTGGCCATGAACCTCCATCATTTCCTCCTTCAAACAGCGATGCCCAACCAGAGAAAGAGAAAGAAAAAGAGAATTCGGAGAAAGAGAAGGAAAAGGAGAATTCAGATTCTTCGTCAAAGAAGAGGAGCTTCAGTGAGATGACCGTGGAAGGAGGAGCAGGTGAAGTTGCTGATGGATCCGATGATCCTCCAGTCATGCCTGAAGATTCTGTTTTGGATAGCAAGGATGTGTGCTTTGATGATAGTAACAGCATGGAACTTGAACCAGGGAGGTGTAAAAGAACAGATGGGAAGAACTGGAGATGTTCTAAGGATGTTGTTCCAGATCAAAAGTACTGTGAGCGACACATGCATAGAGGCCGTAGTCGTTCAAGAAAGCATGTGGAGACCACCTCCCAAGTAACTTCTTCACCAAACAATATAGATGATTCAAATACCAATTTGTCCATTTCAATCCCACCTTCTCATGACTAA 804 0.4341 MGSSVVTPEDVLESLMNDGTIDAIRLKIINQLKANEELKNNTITMVEQSKVLNTPGAEKQTKRELFDALRQELETPVLEKASKSVWELILDNDGLGKEISETVERVFYRLSGHEPPSFPPSNSDAQPEKEKEKENSEKEKEKENSDSSSKKRSFSEMTVEGGAGEVADGSDDPPVMPEDSVLDSKDVCFDDSNSMELEPGRCKRTDGKNWRCSKDVVPDQKYCERHMHRGRSRSRKHVETTSQVTSSPNNIDDSNTNLSISIPPSHD* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01201 267 ProSiteProfiles WRC domain profile. 196 240 IPR014977 -
Eupl12g01201 267 Pfam WRC 198 239 IPR014977 -
Eupl12g01201 267 Coils Coil 21 41 - -
Eupl12g01201 267 PANTHER ANTIGENIC HEAT-STABLE PROTEIN 2 248 - -
Eupl12g01201 267 MobiDBLite consensus disorder prediction 239 267 - -
Eupl12g01201 267 MobiDBLite consensus disorder prediction 225 267 - -
Eupl12g01201 267 MobiDBLite consensus disorder prediction 125 150 - -
Eupl12g01201 267 MobiDBLite consensus disorder prediction 191 210 - -
Eupl12g01201 267 MobiDBLite consensus disorder prediction 111 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01201 Eupl-Chr12 28478033 28483356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01201 193 243 GRF Transcription Factor Family AT4G24150 70.588 1.72e-21 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01201 - - psom:113358145 267.314