Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01177 ATGGCTGCTGGAAGAGGGATTCACCAGTTGCTGAGGAGAAAATTCCAATCCCTATCTACTCCACCTCCAGTATTGTCCTCCCTTATCTCGAAGCAGGATCAAGATGGAGCTGGATCTGCTGGCATGAAGTCCCTAAGAGCGCTGGCACTCCTTGGAGCAGGTGTTTCTGGGCTTTTGAGTTTCGGAACAATAGCATCTGCAGATGAGGCGGAGCATGGCTTGGAGTGTCCAAATTATCCCTGGCCTCACAAAGGCATTCTCAGTTCATATGATCATGCATCGATTCGTCGTGGTCATCAGGTTTATCAGCAAGTTTGTGCATCTTGTCACTCAATGTCTCTAATTTCGTATCGTGATCTTGTGGGTGTGGCATATACAGAGGAGGAGACAAAGGCTATGGCAGCTGAGATTGAGGTGGTTGATGGACCTAATGACGAGGGTGAGATGTTTACCCGCCCTGGTAAGCTAAGTGATCGTTTCCCACAGCCATATGCTAATGAACAAGCAGCAAGGTTCGCCAATGGAGGAGCATATCCTCCGGATCTAAGCCTCATCACCAAGGCTCGTCACAATGGTCAGAACTATGTGTTTGCCCTTCTTACTGGCTACCGTGATCCTCCTGCTGGTGTTTCGATCCGAGATGGGCTGCACTATAATCCTTACTTCCCGGGTGGAGCAATAGCCATGCCCCAAATGCTTATTGATGGTGCTCTCGAGTACGAAGATGGTACCCCTGCAACAGAATCTCAGATGGGGAAAGATGTTGTGACATTTTTGTCGTGGGCAGCAGAACCAGAAATGGAAGAGAGGAAACTGATGGGTTTCAAATGGATATTCGTACTGTCGCTCGCACTTCTCCAAGCTGCTTATTACCGGCGCTTGAAGTGGTCTGTTCTGAAGTCTCGCAAGTTGGTCCTTGACGTTGTCAACTGA 933 0.4887 MAAGRGIHQLLRRKFQSLSTPPPVLSSLISKQDQDGAGSAGMKSLRALALLGAGVSGLLSFGTIASADEAEHGLECPNYPWPHKGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEQAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIRDGLHYNPYFPGGAIAMPQMLIDGALEYEDGTPATESQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLKWSVLKSRKLVLDVVN* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01177 310 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 265 309 IPR021157 -
Eupl12g01177 310 ProSiteProfiles Cytochrome c family profile. 93 200 IPR009056 GO:0009055|GO:0020037
Eupl12g01177 310 PANTHER CYTOCHROME C1 24 308 IPR002326 GO:0009055|GO:0020037
Eupl12g01177 310 FunFam Cytochrome c1, heme protein, mitochondrial 266 310 - -
Eupl12g01177 310 Gene3D - 70 265 IPR036909 GO:0009055|GO:0020037
Eupl12g01177 310 Pfam Cytochrome C1 family 81 297 IPR002326 GO:0009055|GO:0020037
Eupl12g01177 310 FunFam Cytochrome c1, heme protein 70 265 - -
Eupl12g01177 310 Gene3D - 266 309 - -
Eupl12g01177 310 PRINTS Cytochrome C1 signature 99 118 IPR002326 GO:0009055|GO:0020037
Eupl12g01177 310 PRINTS Cytochrome C1 signature 215 226 IPR002326 GO:0009055|GO:0020037
Eupl12g01177 310 PRINTS Cytochrome C1 signature 79 98 IPR002326 GO:0009055|GO:0020037
Eupl12g01177 310 PRINTS Cytochrome C1 signature 246 265 IPR002326 GO:0009055|GO:0020037
Eupl12g01177 310 PRINTS Cytochrome C1 signature 177 201 IPR002326 GO:0009055|GO:0020037
Eupl12g01177 310 PRINTS Cytochrome C1 signature 144 164 IPR002326 GO:0009055|GO:0020037
Eupl12g01177 310 PRINTS Cytochrome C1 signature 265 280 IPR002326 GO:0009055|GO:0020037
Eupl12g01177 310 PRINTS Cytochrome C1 signature 226 245 IPR002326 GO:0009055|GO:0020037
Eupl12g01177 310 SUPERFAMILY Cytochrome c 74 264 IPR036909 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01177 Eupl-Chr12 28179509 28188138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01177 1 310 Chloroplast and Mitochondria Gene Families AT3G27240 85.161 0.0 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01177 K00413 - ming:122071747 566.229