Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01163 ATGGCTTCGAAGCCATGGTTACACCCGGCTCCGACCTACCGTTCAGTGGAGACGGCCTGGGAGACCGACGAGGATGCTCCGGGCCCACGCTGTAGTCACACGCTCACCGCCGTTGCCGCCACCAAATCTCACGGCCCTCGACTCATTCTCTTTGGTGGTGTAACCGCCATCGACGGCGGCGCCACCTCCTCTGCTCCCGGAATCAGGTTGGCGGGCGTGAACAATTCAGTTCACTGTTACGATATTCTTACCAAGAAATGGACTAGGATCCGGCCTGCTGGAGAGCCGCCTTCACCTAGGGCAGCTCATGTTGCGGCTGCTGTTGGTTCTATGGTTGTTTTCCAGGGGGGCATAGGTCCCGCTGGGCATTCCACTGATGATCTTTATGTGCTCGACTTGACCAATGACAAATTCAAGTGGCACAGAGTGGTCGTTCAAGGACCAGGCCCTGGGCCTCGCTATGGCCATGCGATGGACTTGGTTGCTCAGAGATATCTCGTTTCTGTTAGTGGCTATGATGGCAAGAGAGTGCTGTCAGACGCTTGGGCTTTGGATACTGCACAGAAACCATATAGATGGCAGAGGATCAATGCAGAAGGCGATAAACCTTCTGCTAGAGCGTATGCAACAGCTAGTGCCCGCTCAGATGGCATGTTTTTGCTTTGTGGTGGAAGAGACGCTTTGGGCATTCCACTTGCAGATGCTTATGGTCTACTCATGCATACGAATGGTCAGTGGGAATGGACTCTTGCACCTGGGCAGTCTCCTTCACCAAGGTATCAACATGCGGCGGTATTCGTTGGTGCTCAACTGCATATTACTGGAGGTGCTCTTAGGGGAGGACGGGCTGTAGAAGGTGAAGCTGCTATTACAGTATTGGACACTGCTGCTGGGGTATGGTTAGATAGAAATGGGATTGTGACTTCCTCTCGCACAAGCAAGCCTGTAATTGAAAGTGATGCTTCATTGGAGCTTATGCGTCGTAACCGCCATGCATCTGCATCTATCGAAGATCAGATATATATTTATGGTGGTCTCAGAGGAGAGATACTGCTTGATGATCTTCTCATTGCGGAATATTCACCATCTTCTATCTTCACTTCTGAGAGGACTTCAGCTACAACAAGTTCCAAAACTAATCAGCCTAATGCAAGCTCCTATGCAGCATCGAATTCAGATGGCAGACTAGAAATCCCCTCTCCTGATGGCTTGAGCATGGACAAGAACTCTATGGAGAAACTGGTGGAGGCTTCAGCTGCTGAAGCTGAGGCAGCTAGTGCTGTCTGGCAAGCTGTGAAAGCTGCAACTGCAGTTCCCGGAGAAGAAACATCTGTCTCAAATGACAACTTGCAAGTTCCAGAAACATCCCCAGATGAGAGAAACACTGAAGCAGATGTCCGGCTTCACTCTAGAGCTGTAGTAGTTGCTAAAGAGGCGATTGGTAACTTGGGTGGGCTGGTAAGGCAGTTATCCTTGGATCAGTTTGAAAATGAGAGCAGACGAATGAATCCCTTGAATAGTGACCCAGCATATCCTACGAAAAAATTATTCACTAGACAGAAGTCACCCCAGGGCTTGCACAAGAAGATTATATCTCTCTTGCTCAGGCCCCGGAACTGGAAAGCTCCTTCTAATAGAAATTTTTTTCTGGACTCCTATGAAGTGGGTGAGCTTTGTTATGCTGCAGAGCAGATCTTTATGCAGGAATCTACAGTTTTGCAGTTGAAGGCTCCAGTAAAAATATTCGGTGATCTTCATGGACAGTTTGGTGATTTAATGCGCTTATTTGATGAATACGGATTTCCTTCAACTGCTGGAGATATAACGTATATTGACTATTTATTTTTGGGAGATTACGTTGACCGTGGACAACATAGCTTGGAAACTATAACCTTGCTTCTAGCTCTCAAGATTGAGTATCCTGAGAATGTTCACCTGATAAGAGGAAATCATGAAGCTGCTGACATAAATGCTCTGTTTGGTTTCCGTCTTGAATGCATTGAGAGAATGGGAGAGAGTGATGGGATATGGGCGTGGACTCGGTTCAATCAACTTTTCAACTTTCTCCCACTTGCTGCACTTATTGAGAAGAAAATTGTTTGCATGCATGGTGGCATTGGGAGGTCAATATACTCTGTAGAACAGATAGAGAAACTTGAAAGGCCCATAACGATGGATGGCGGATCCATCATTCTAATGGACCTTCTATGGTATACTCTAATTCAGTTCATCTACGCATTGACATCAATCTTGGTTCACATATTAGTTGTCTTACTACATCTGTCTTGTATAATTTACAGGTCAGACCCCACAGAAAATGATAGTATAGAGGGATTGAGACCAAATGCTAGGGGGCCTGGCCTAGTCACTTTCGGGCCTGATCGGGTCACAGACTTCTGTAAGAAAAATAAATTGCAGCTCATTATAAGAGCCCACGAATGTGTTATGGATGGTTTTGAACGGTTTGCTCAGGGACAGTTGATTACTCTATTTTCAGCGACCAACTACTGTGGGACGGCAAACAATGCTGGGGCAATACTGGTGGTTGGAAGGGGATTGGTCGTGGTTCCCAAATTGATTCATCCCTTACCACCACCCCTTCAGTCGCCCGAGACGTCTCCAGAACGTGTATTAGATGACACATGGATGCAGGAGCTTAACATTCAAAGACCTCCAACTCCAACTCGGGGCCGGCCACAGCCTGACCATGACCGAAGCTCACTCGCCTATTTTTGA 2736 0.474 MASKPWLHPAPTYRSVETAWETDEDAPGPRCSHTLTAVAATKSHGPRLILFGGVTAIDGGATSSAPGIRLAGVNNSVHCYDILTKKWTRIRPAGEPPSPRAAHVAAAVGSMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGPGPGPRYGHAMDLVAQRYLVSVSGYDGKRVLSDAWALDTAQKPYRWQRINAEGDKPSARAYATASARSDGMFLLCGGRDALGIPLADAYGLLMHTNGQWEWTLAPGQSPSPRYQHAAVFVGAQLHITGGALRGGRAVEGEAAITVLDTAAGVWLDRNGIVTSSRTSKPVIESDASLELMRRNRHASASIEDQIYIYGGLRGEILLDDLLIAEYSPSSIFTSERTSATTSSKTNQPNASSYAASNSDGRLEIPSPDGLSMDKNSMEKLVEASAAEAEAASAVWQAVKAATAVPGEETSVSNDNLQVPETSPDERNTEADVRLHSRAVVVAKEAIGNLGGLVRQLSLDQFENESRRMNPLNSDPAYPTKKLFTRQKSPQGLHKKIISLLLRPRNWKAPSNRNFFLDSYEVGELCYAAEQIFMQESTVLQLKAPVKIFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGESDGIWAWTRFNQLFNFLPLAALIEKKIVCMHGGIGRSIYSVEQIEKLERPITMDGGSIILMDLLWYTLIQFIYALTSILVHILVVLLHLSCIIYRSDPTENDSIEGLRPNARGPGLVTFGPDRVTDFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQSPETSPERVLDDTWMQELNIQRPPTPTRGRPQPDHDRSSLAYF* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01163 911 SMART pp2a_7 550 866 IPR006186 GO:0016787
Eupl12g01163 911 MobiDBLite consensus disorder prediction 440 457 - -
Eupl12g01163 911 MobiDBLite consensus disorder prediction 367 393 - -
Eupl12g01163 911 MobiDBLite consensus disorder prediction 887 911 - -
Eupl12g01163 911 Pfam Calcineurin-like phosphoesterase 578 815 IPR004843 GO:0016787
Eupl12g01163 911 Gene3D - 524 872 IPR029052 -
Eupl12g01163 911 MobiDBLite consensus disorder prediction 367 407 - -
Eupl12g01163 911 SUPERFAMILY Metallo-dependent phosphatases 536 872 IPR029052 -
Eupl12g01163 911 MobiDBLite consensus disorder prediction 438 462 - -
Eupl12g01163 911 Pfam Galactose oxidase, central domain 112 158 - -
Eupl12g01163 911 Gene3D - 9 229 IPR015915 GO:0005515
Eupl12g01163 911 PIRSF STPPP_BSU1 1 911 IPR012391 GO:0004721|GO:0009742
Eupl12g01163 911 ProSitePatterns Serine/threonine specific protein phosphatases signature. 647 652 IPR006186 GO:0016787
Eupl12g01163 911 FunFam Serine/threonine-protein phosphatase 9 193 - -
Eupl12g01163 911 Gene3D - 243 396 IPR015915 GO:0005515
Eupl12g01163 911 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 767 911 - -
Eupl12g01163 911 PRINTS Serine/threonine phosphatase family signature 646 670 IPR006186 GO:0016787
Eupl12g01163 911 PRINTS Serine/threonine phosphatase family signature 804 824 IPR006186 GO:0016787
Eupl12g01163 911 PRINTS Serine/threonine phosphatase family signature 613 640 IPR006186 GO:0016787
Eupl12g01163 911 PRINTS Serine/threonine phosphatase family signature 826 842 IPR006186 GO:0016787
Eupl12g01163 911 PRINTS Serine/threonine phosphatase family signature 578 605 IPR006186 GO:0016787
Eupl12g01163 911 PRINTS Serine/threonine phosphatase family signature 684 710 IPR006186 GO:0016787
Eupl12g01163 911 SUPERFAMILY Kelch motif 71 360 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01163 Eupl-Chr12 28008952 28029831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01163 558 807 Calmodulin-binding Proteins AT5G63870 32.171 2.07e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01163 K01090 - nnu:104613386 1508.43