Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01105 ATGGGCGGGTGTTTTCCGTGCTTTGGATCGTCAAGTACGGAGAAAAATCAAGTTGTGAAGGAAAGTGGGAAGAAGGATTTTGTGAAGGAGGGTTCAGCTGCTCAATCTCATAATGTTAGCAGAGTTAGCTCAGACAAATTAAAATCCCGGGGTGGTTCTGATTCTAAGAAGGAAACATCAGTTCCCAAAGATGGGCCAACTGCACATATTGCTGCTCAGACTTTTGCATTTAAAGACCTTGCTGCCGCCACTAAGAACTTTAGGCAAGAGTGCCTTTTGGGTGAAGGAGGGTTTGGACGAGTGTACAAGGGTCGCTTGGAGAGCACTGGGCAGGTAGTAGCAGTGAAACAGCTTGACAGGAATGGCCTTCAAGGGAATAGAGAGTTCTTGGTGGAGGTTCTCATGCTCAGCCTCTTGCACCATCCTAACCTTGTCAATTTGATTGGTTATTGCGCTGATGGGGATCAGCGCCTCCTTGTTTACGAGTTCATGCCATTGGGATCATTGGAGGATCATTTACATGATCTTCCACCCAACAAGGAGCCTCTGGACTGGAATACAAGGATGAAGATTGCAGCTGGTGCAGCTAAGGGCTTGGAGTACTTGCATGATAAAGCAAACCCTCCTGTAATTTACAGGGATTTCAAATCATCCAATATCCTTCTTGACGAAGGGTATCATCCAAAGCTGTCAGATTTTGGGCTTGCAAAGCTTGGACCCGTTGGTGACAAGACCCATGTTTCCACACGAGTGATGGGAACATATGGCTATTGTGCTCCGGAGTATGCTATGACTGGCCAACTCACTCTGAAATCTGATGTCTACAGTTTTGGTGTAGTCTTCCTTGAGCTGATCACTGGGCGCAAGGCAATCGACAATACCCGGGCTTCTGGGGAGCATAATCTGGTTGCGTGGGCACGGCCACTGTTCAAGGACCGTAGGAAGTTCCCAAAGATGGCCGACCCACTTTTGCAAGGCCATTATCCAATGCGAGGCCTTTACCAAGCTCTTGCTGTTGCAGCGATGTGTTTGCAAGAACAAGCTGCCACTCGTCCTCTTATAGGGGATGTTGTTACTGCTCTCTCATATTTAGCTTCCCAAATTTACGATCCAAATGCAGCTGCTGCTCAAAATAACAGAGTTGGTCCATCCACCCCTAGGGACAAGGACAACAGAAAAAGCCTGGGTGGTGGGCTCAACAACCAAGATGAGGTTGGACATGGTGGGAGACATGGTTCCCAATCCCCTCATCAGGATTCTCCCAATTTCAGACACAGAGACTCTGTTCGCGGGGTGAGCTTCGGTGCAGAGGTTGGCAGAGGTGAAACAAGTGGTGGGTCTGGGAGGAAGTTTGGCTTGGATGAATTAGAGAGGCAAGACTCTCAGAGGGACAGCCCTGCCCATGCAGGGAAAGCAAGGGAGACACCAGGGAATTTTAACCGAGATCTTGATAGAGAGCATGCAGTTGCAGAGGCAAAAGTATGGGGTGAGAATTGGAGAGAGAGAAAGCGGACAAATGCATTGGGTAGCTTTGATGGTACAAAGGAGTTACTGTGA 1557 0.4849 MGGCFPCFGSSSTEKNQVVKESGKKDFVKEGSAAQSHNVSRVSSDKLKSRGGSDSKKETSVPKDGPTAHIAAQTFAFKDLAAATKNFRQECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPNKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRASGEHNLVAWARPLFKDRRKFPKMADPLLQGHYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALSYLASQIYDPNAAAAQNNRVGPSTPRDKDNRKSLGGGLNNQDEVGHGGRHGSQSPHQDSPNFRHRDSVRGVSFGAEVGRGETSGGSGRKFGLDELERQDSQRDSPAHAGKARETPGNFNRDLDREHAVAEAKVWGENWRERKRTNALGSFDGTKELL* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01105 518 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Eupl12g01105 518 MobiDBLite consensus disorder prediction 375 485 - -
Eupl12g01105 518 FunFam Serine/threonine-protein kinase PBS1 60 163 - -
Eupl12g01105 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Eupl12g01105 518 FunFam Serine/threonine-protein kinase PBS1 164 379 - -
Eupl12g01105 518 Pfam Protein kinase domain 89 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g01105 518 ProSiteProfiles Protein kinase domain profile. 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g01105 518 Gene3D Phosphorylase Kinase; domain 1 49 163 - -
Eupl12g01105 518 SUPERFAMILY Protein kinase-like (PK-like) 70 361 IPR011009 -
Eupl12g01105 518 MobiDBLite consensus disorder prediction 43 63 - -
Eupl12g01105 518 Gene3D Transferase(Phosphotransferase) domain 1 164 381 - -
Eupl12g01105 518 MobiDBLite consensus disorder prediction 20 66 - -
Eupl12g01105 518 PANTHER OS07G0668900 PROTEIN 4 373 - -
Eupl12g01105 518 MobiDBLite consensus disorder prediction 451 485 - -
Eupl12g01105 518 CDD STKc_IRAK 93 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01105 Eupl-Chr12 27385778 27393278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01105 4 389 Glycoside Hydrolase AT3G07070 62.016 8.68e-170 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Eupl12g01105 Pkinase 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01105 - - nnu:104587601 919.842