Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01083 ATGAAGAGGAAAACCCTAGTGAGGAGCAGGAGGAGAGAGAAGGGAAAAATGAAGGGTACGCTTGCAAGGCATCTGACGGTTCAGGTAGGCCAGGTCTCTTTGTTTCCCCTCCAACAGTCCTCTTCTTCCTCCTCCAACCCTTCTCGCTTCCAGAAGCTTCTAGAAGTCGAACAAGAAGATCATCGTCTCTCTTCTCTCTCCCTTGACGGCGATAATGTCGATGAAAAAGATTTCATCCTCAGCCAGGACTTCTTCTGCACCCCAGATTATATTACCCCAGATGGGCAACAAATCTCCAACACTTTGGATTGCAACAAGGAAAATATCCCCTGCCCCAAATCGCCAGAAAAGTTAAACACTGTTAGAAGCAAAAGACAAAGACAGGAGGGTTTCTCAATCAATTCCCTCAATTCCAACTTGTCCTGCCATCAACAAGTAATGGAACTTGCTTCAGATACATTTGATTCAGATGAACTGAAGACAGAAAAACCATCTGTAAATGGATCAGAAAAGAAACAGAATTATGTTTCACAATCTGCGGTGGCTTTGCGTTGTCGAGTTATGCCCCCCCCTTGCATCAGGAACCCGTATCTAAAGCAAATTGCAGAAATGGATATAGATCCCTTTGGCAACCGAAAATCAAAATCTACAGGTTATTTCTCCTCAGTTGTTGGTGGAGATGGTCTTTCGCGTTACCGAACAGATTTCCATGAGATCGAGCAAATTGGCTACGGGAACTTCAGCCGTGTTTTCAAAGTTTTTAAGAGGATTGATGGTTGCATGTATGCAGTGAAACATAGCATAAGGCAGTTGCATCAAGACACAGAAAGGAGACGAGCATTGATGGAAGTTCAAGCTCTAGCAGCTTTAGGATCTCATGAAAACGTTGTTGGGTACTACACTTCTTGGTTTGAAAACGAGCAACTCTACATCCAGATGGAGCTCTGCGATTGCAGCCTATCCATCAAGAAGTCTTCTCAATTATTGACAGAGGGAGACGTGTTGGAAGCTATGCATCAGATTGCCAAGGCATTGCAGTTCATACATGAACGAGGAATCGCACACTTAGATGTAAAGCCCGATAATATTTATGTAAAAGATGGTGTTTATAAGCTTGGTGATTTTGGTTGTGCAACGCTCATCGATAGAAGCATACCCATCGAAGAAGGTGATGCACGCTACATGCCTCAGGAGATTCTGAATGACAAGTATGAACATCTTGACAAGGTTGATATCTTCTCCCTGGGAGCTGCCATGTATGAGCTTGTCAAAGGGTCACCATTGCCGGAGTCCGGACCTCAGTTTTTGAATCTCAGAGAGGGGAAGATCCCACTCCTTCCTGGACATTCTATGCAATTCCAGAACTTACTCAAGGTGATGGTGGATCCAGACCCAGTTCGACGACCTTCTGCTAAGGAGCTAGTAGAAAATCCCATCTTCGACAGGGCCCGTAGAACTGCAAGAAACATGTAA 1473 0.4453 MKRKTLVRSRRREKGKMKGTLARHLTVQVGQVSLFPLQQSSSSSSNPSRFQKLLEVEQEDHRLSSLSLDGDNVDEKDFILSQDFFCTPDYITPDGQQISNTLDCNKENIPCPKSPEKLNTVRSKRQRQEGFSINSLNSNLSCHQQVMELASDTFDSDELKTEKPSVNGSEKKQNYVSQSAVALRCRVMPPPCIRNPYLKQIAEMDIDPFGNRKSKSTGYFSSVVGGDGLSRYRTDFHEIEQIGYGNFSRVFKVFKRIDGCMYAVKHSIRQLHQDTERRRALMEVQALAALGSHENVVGYYTSWFENEQLYIQMELCDCSLSIKKSSQLLTEGDVLEAMHQIAKALQFIHERGIAHLDVKPDNIYVKDGVYKLGDFGCATLIDRSIPIEEGDARYMPQEILNDKYEHLDKVDIFSLGAAMYELVKGSPLPESGPQFLNLREGKIPLLPGHSMQFQNLLKVMVDPDPVRRPSAKELVENPIFDRARRTARNM* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01083 490 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 53 483 - -
Eupl12g01083 490 FunFam WEE protein kinase 226 314 - -
Eupl12g01083 490 Pfam Protein kinase domain 236 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g01083 490 ProSitePatterns Protein kinases ATP-binding region signature. 242 265 IPR017441 GO:0005524
Eupl12g01083 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Eupl12g01083 490 ProSiteProfiles Protein kinase domain profile. 236 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g01083 490 Gene3D Phosphorylase Kinase; domain 1 227 314 - -
Eupl12g01083 490 Gene3D Transferase(Phosphotransferase) domain 1 315 484 - -
Eupl12g01083 490 FunFam Wee1-like protein kinase 315 484 - -
Eupl12g01083 490 SUPERFAMILY Protein kinase-like (PK-like) 229 482 IPR011009 -
Eupl12g01083 490 SMART serkin_6 236 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01083 Eupl-Chr12 27163401 27170398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01083 2 484 Core Cell Cycle Gene Families AT1G02970 61.759 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Eupl12g01083 Pkinase 7.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01083 K06632 - nnu:104606100 783.097