Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01075 ATGGATCATCCACGATCAACCTCTGGGAATGGCGAGGATAATGTGGGGATTCCAGAGGATTTGCGTTGTAAGAGGTCAGATGGGAAACAGTGGAGGTGCAGTGCAATGTCCATGCCTGACAAGACTGTATGTGAAAAACACTACATCCAGGCAAAGAAGAGGGCAGCAAATTCTGCATTAAGAGCCAGTATAAAGAAGGCCAAGAGAAAATCATTAGGTGAAAGTGATGTTTACTTGGAGAGTAAGAACGACGAAATAGATACACCTCTCATGAGCACAAAGGGTGTAGATTTCTCTGCTTCTGTCTCTAGTAAGAAGTACAAGGAGAAGATTCCCAAAAGACTCTATTCTCCCGAGACACCTCCAGTGAGGAGTTCGTCTACCCGTAATCCTTTAAAATTTAATGATGATGCACACAGAGATATTGCACAACATGATGAGAACCGGAAATCTTCATATAGGACACCACCCTCTTCTGCAATGGAATTATCAAGGAATAGAACTCAGAAGAACTTTGATGCAAGTGCTCTGGCGGAACACTCTGATAGAAGCACAGATTCTTCTGATGGTGCTGGTGGGCTAACTTGCCATCAGTGTCGGAGGAACGACAGAGGCAGAGTTATTTGGTGTCTGAGATGTGATAGGAGAGGATATTGTGAGAGCTGCATCTCTAAATGGTACGCTGACATCCCACTGGAGGAGATCCAGAGGGTCTGCCCTGCATGCCGTGGGACTTGTAATTGCAAGGTGTGCTTACGTGGAGATAATTTGATAAAGCCATTGTTTTCTGAGCTGCAGGTTAGGATCCGGGAATTATCCGTCCACGATAAGTTGCAATATCTCCACTGCCTCTTATCTTCGGTTCTCCCTGTAATCAAGCAGATCCACTCTGACCAGTGCTTCGAACTGGAGCTGGAAACCAGGCTTCATGGAACCAAAGTAGAGATTGCCAGGGCAAAGTTGCATGCAGACGAGCAGATGTGCTGTGATTGCTGTAGGATACCCATAATCGATTATCATCGGCACTGTGCAAATTGCTTTTACGATCTATGCCTGAAATGTTGTCGGGATCTTCGGCAAGCATCTTTGGTAGGAGTCAAAGGAGAAATAGCCGAAAATCAGGTTTCTGAGATAAGCCAGGATGGAGCAACTGCAACAAAGCAACTGAAATCATCTGAAGTAAGAATGAATTTAGCAGATCAGTTTCCTGATTGGAAAGCCAACAGCGATGGTGGTATTCCATGCCCGCATAAGGAGTCAGGTGACTGTGATTGCCCATCATTAACCCTAAGGCGCATCTTCAAGATGAACTGGGTTGCAAAACTGTTGAAAAATGTTGACGAAATGGTTAATGGTTGTAAGGTATATGATGTAGACAGTCCACATTCTAATGGGCTAAGTGATTCTAAGCTCTGCCAATCTGCACACAGAGAGGAGAGCAACGATAATTTCCTCTATTGCCCAGCATCTCAAGATTTAAAACTTGAAGGAGTTGGCCATTTCAAAAAGCATTGGGTCAGGGGTGAACCCATCATTGTTAAGCAGGTGTGCGATTTCACGTCAAGTTCAAGCTGGGATCCCATGGTTATATGGAGAGGGATTCGGGAGACTGCAGATGAGAAAACGAAAGATGACAACAGAACTGTTAAAGCCATAGATTGCTTGGATTGGTCTGAGGTTGATATAGAACTTGGTCAATTCATCAAAGGATATTCAGAGGGACGAATTCATGAAAATGGTTGGCCAGAAATGTTGAAGTTGAAGGATTGGCCATCCCCCAGTGCTGCCGAAGAGTTTTTATTGTACCAGAGACCTGAATTTATCAGCAAATTGCCATTGCTCGAGTATATCCATTCAAAATGGGGTATTCTGAATGTTGCTGCAAAGCTGCCCCATTATTCTTTACAGAATGATGTCGGACCCAAATTTTTTATTTCTTATGGGACATATGAGGAACTTTGTAGAGGTGATTCTGTCACCAATCTCCATACCAATATGCGTGACATGGTATACCTATTGATGCATACGTTTGACGTGAAATTAAAAGGCTGGCAGCGCACAAAGATTGAGAAGATACAGAAAGCTTTTAGGGAATCCGAAGCAAAAGAGTCAGTTGATGATGCACAAACAAGTGTGGTTGAGGGTGTCAAATCACCTGATTTGGCACTTAGTGAACATGGTAAACAGAATGAATGTGGTCCAGGGTTGAACACAAGTGAAGATGAAATCATGGAGGACCAAGAATTTAATGGGTCAGAAATTTTTTCTGGTGGTGAAAGGAAGGAAGTTGATGATTCTGGCTGCTCAGACAGAGATAGTGGAGCTGTTGTGTCGGAAAAGGCTCATGTGGGAGCCATTTGGGATGTCTTCCGTCGGGAGGATGTTCCAAAGTTGATTGAGTATTTGAGAGTTCATTGGAAGGAATTTAGGAAGCCTGCTAGTCTCCCAAATGATTCAGGCATATATCCTCTTTATGATCAAGCGATTTTCCTAAATAGAGATCATAAAAGAAAATTGGAGGAGGAATTCGGAATAGAGCCATGGACATTTGAACAAAACATAGGGGAGGCTGTATTCATCCCCACTGGATGCCCTTTCCAAGTGAGGAACCTTAAGTCTTCCGTTCAGTTGGCCCTTGATTTTTTGTCTCCTGAGAGCTTGGGGGAGTCTGTAAGGTTGGCTGAAGAAATCCGCTGTCTTCCAAATGACCATGAAGCGAAGCTTCAGATGTTGGAGGTGGGGAAGATGTCACTATATGCAGCCAGTTCGGCCATTAGAGAAGTTCAAAAGTTGGTACTTGATCCCAAAACTGGGGCGGAGCTTGGATTTGAGGACCCAAACTTAACTGCAATGGTTTCCGAGAACTTGGAGAAGATGGTTAAGAGAAGGCAGATTTGTGTTTGA 2904 0.4384 MDHPRSTSGNGEDNVGIPEDLRCKRSDGKQWRCSAMSMPDKTVCEKHYIQAKKRAANSALRASIKKAKRKSLGESDVYLESKNDEIDTPLMSTKGVDFSASVSSKKYKEKIPKRLYSPETPPVRSSSTRNPLKFNDDAHRDIAQHDENRKSSYRTPPSSAMELSRNRTQKNFDASALAEHSDRSTDSSDGAGGLTCHQCRRNDRGRVIWCLRCDRRGYCESCISKWYADIPLEEIQRVCPACRGTCNCKVCLRGDNLIKPLFSELQVRIRELSVHDKLQYLHCLLSSVLPVIKQIHSDQCFELELETRLHGTKVEIARAKLHADEQMCCDCCRIPIIDYHRHCANCFYDLCLKCCRDLRQASLVGVKGEIAENQVSEISQDGATATKQLKSSEVRMNLADQFPDWKANSDGGIPCPHKESGDCDCPSLTLRRIFKMNWVAKLLKNVDEMVNGCKVYDVDSPHSNGLSDSKLCQSAHREESNDNFLYCPASQDLKLEGVGHFKKHWVRGEPIIVKQVCDFTSSSSWDPMVIWRGIRETADEKTKDDNRTVKAIDCLDWSEVDIELGQFIKGYSEGRIHENGWPEMLKLKDWPSPSAAEEFLLYQRPEFISKLPLLEYIHSKWGILNVAAKLPHYSLQNDVGPKFFISYGTYEELCRGDSVTNLHTNMRDMVYLLMHTFDVKLKGWQRTKIEKIQKAFRESEAKESVDDAQTSVVEGVKSPDLALSEHGKQNECGPGLNTSEDEIMEDQEFNGSEIFSGGERKEVDDSGCSDRDSGAVVSEKAHVGAIWDVFRREDVPKLIEYLRVHWKEFRKPASLPNDSGIYPLYDQAIFLNRDHKRKLEEEFGIEPWTFEQNIGEAVFIPTGCPFQVRNLKSSVQLALDFLSPESLGESVRLAEEIRCLPNDHEAKLQMLEVGKMSLYAASSAIREVQKLVLDPKTGAELGFEDPNLTAMVSENLEKMVKRRQICV* 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01075 967 Pfam WRC 18 58 IPR014977 -
Eupl12g01075 967 ProSiteProfiles WRC domain profile. 17 61 IPR014977 -
Eupl12g01075 967 MobiDBLite consensus disorder prediction 133 152 - -
Eupl12g01075 967 Gene3D Cupin 485 907 - -
Eupl12g01075 967 SMART cupin_9 600 898 IPR003347 -
Eupl12g01075 967 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 19 932 IPR045109 GO:0032454|GO:0033169
Eupl12g01075 967 MobiDBLite consensus disorder prediction 1 21 - -
Eupl12g01075 967 ProSiteProfiles JmjC domain profile. 593 898 IPR003347 -
Eupl12g01075 967 ProSiteProfiles Zinc finger RING-type profile. 196 243 IPR001841 -
Eupl12g01075 967 MobiDBLite consensus disorder prediction 115 166 - -
Eupl12g01075 967 Pfam JmjC domain, hydroxylase 782 881 IPR003347 -
Eupl12g01075 967 SUPERFAMILY Clavaminate synthase-like 500 910 - -
Eupl12g01075 967 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 192 256 IPR018866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01075 Eupl-Chr12 27011941 27027015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01075 18 58 GRF Transcription Factor Family AT3G13960 51.220 6.62e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Eupl12g01075 JmjC 3.9e-08 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01075 K15601 - nnu:104586476 1511.51