Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01058 ATGCTAGGAGAAACAATTGCTGAGGCCGATGGTGAACTTCAGGTTAGTTTCGGCTACCAATGCAATGGCAAGAATGAAAGTTCCCGTGAGGTTTCTGATGGATATGAGATCACATCTGGAATTAAACTTCGAAGGCGCAGTGGCTCATTTTCTTGCTTATCTGGGGCCGCCCTAAGTGCCAATGCCACATTGGCGAACACAAATATCTGCAATGGTCTGATCGGTGCAGGAATACTTCCTAGTTTGGATTCCCCGAAGTCATTCCGGAGGGTTTCCTCATCATCATCCCTTGCAAGGTTGGATATATTATCATCTTCGCTCCAGAGTGGAATGTCAACCTTGAGTTGCAGTGAATCTAATCAAAGTGAGCCTCCTGAATGGGATTCCAGTACTTTGAAATCCATGAGTGCTCCTTCGAGAAGTGAAGGTTTCCTCAATGCCATGGAAGTGGAAGTGGCAGGTGGTGCTGCTGGTGAAGATAGAGTCCAAGCTGTTTGTTCAGAAGAAGACGGGTGGCTCTTTTGCGCAATCTATGATGGGTTCAATGGAAGGGATGCAGCTGATTTTTTGGCTGGGACATTGTATGAGACCATCAGATTCTACTTGAATCTTTTGGACAGGGAACTGAAGCAGGACAGTGTTGTAACATCACACAGTTTGGGTTCAGATGGTTTCCTCCAATATTTTCTAGAGGATGGTGAGAAAAGCATTTCTTCAAGAATTTATGATAACAGGGATCTAACAACTAACACCAAGAAAGCTCCATGTGCTAGGAAAGAGGAAGTCCCATATGATTCAGTTAGGCACGGGGTGCTAGATAGTCTCCAACGTGCTCTTAGTCAAGCTGAGAGTGATTTTCTGTATATGGTTGAACAGGAAATGGAGGATCGTCCTGATATAGTAGCCATTGGATCTTGTGTTTTGGTTGTGCTTCTTCACGGTAAGGATCTGTATACACTCAATTTAGGTGACAGTAGAGCTGTGTTGGCAACGTATGGTGAAGTCATCGACATGGATGGAACTGAGGCTTTGGAAGCTATCCAGCTTACTGACAGCCACACTGTTGACAATGAAGTAGAGCGAAAGCAGCTTCTGTGTGATCACCCTGATGATCCCACAACAATTGTAGCTGGAAAAGTGAAAGGGAAACTGAAGTTAACTCGTGCATTTGGAGTTGGTTATTTGAAAAAGAAAAAAATGAATGATGCTTTGATGGGTATTCTTCAAGTCCGGAACCTTTTGAGTCCGCCTTATATCTCCACCCAACCTTCACTGAGCGTTCATAGAATCTCAAAAGACGATCACTTTGTAATAGTTGGGAGCGACGGTTTGTTTGACTTCTTCAGCAATGATGAGGCTGTAAAGCTTGTCCATTCTTATATCTTGAGCAATCCATCAGGTGATCCAGCGAAGTTCCTGCTGGAGCAGCTTGTCTTAAGAGCAGCCGATAGTGCAGGTTTCAGTATGGAAGAGTTAATGAGAATCCCCGCTGGTAGGAGAAGGAACTATCATGATGATGTGACTGTAATCGTAATCATCCTTGGGAGCAACCAGCGAACATCAACAGCTTCAACTTTTTTGTAA 1584 0.4413 MLGETIAEADGELQVSFGYQCNGKNESSREVSDGYEITSGIKLRRRSGSFSCLSGAALSANATLANTNICNGLIGAGILPSLDSPKSFRRVSSSSSLARLDILSSSLQSGMSTLSCSESNQSEPPEWDSSTLKSMSAPSRSEGFLNAMEVEVAGGAAGEDRVQAVCSEEDGWLFCAIYDGFNGRDAADFLAGTLYETIRFYLNLLDRELKQDSVVTSHSLGSDGFLQYFLEDGEKSISSRIYDNRDLTTNTKKAPCARKEEVPYDSVRHGVLDSLQRALSQAESDFLYMVEQEMEDRPDIVAIGSCVLVVLLHGKDLYTLNLGDSRAVLATYGEVIDMDGTEALEAIQLTDSHTVDNEVERKQLLCDHPDDPTTIVAGKVKGKLKLTRAFGVGYLKKKKMNDALMGILQVRNLLSPPYISTQPSLSVHRISKDDHFVIVGSDGLFDFFSNDEAVKLVHSYILSNPSGDPAKFLLEQLVLRAADSAGFSMEELMRIPAGRRRNYHDDVTVIVIILGSNQRTSTASTFL* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01058 527 ProSiteProfiles PPM-type phosphatase domain profile. 134 514 IPR001932 -
Eupl12g01058 527 Gene3D - 121 523 IPR036457 -
Eupl12g01058 527 SUPERFAMILY PP2C-like 158 515 IPR036457 -
Eupl12g01058 527 PANTHER PROTEIN PHOSPHATASE 2C 128 512 IPR015655 GO:0004722|GO:0006470
Eupl12g01058 527 CDD PP2Cc 157 514 IPR001932 -
Eupl12g01058 527 SMART PP2C_4 138 512 IPR001932 -
Eupl12g01058 527 MobiDBLite consensus disorder prediction 111 139 - -
Eupl12g01058 527 Pfam Protein phosphatase 2C 257 465 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01058 Eupl-Chr12 26827350 26833409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01058 11 527 PP2C-type Phosphatase Gene Family AT3G16560 63.308 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01058 - - nnu:104606130 754.207