Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01055 ATGACAGTCTATGTATGTGCATCTGCGAACGTGGCAGCCCTGCTTGAGTGGGCCACAGCCATGCATTCGATTGGTGAATTGTTCTTCTTGTTCGGAGTCGTTGAAACATTCGCCAAGATGCAGAATGATGAGGGTCAAAACATGGATCTTTACATCCCCAGGAAATGTTCCGCTACAAATAGGCTGATTACTTCGAAGGACCATGCGTCCGTTCAGATCAATGTCGGGCATGTGGATGAGAGTGGCATATATACTGGCCACTTCACCACTTTTGCCCTCTGCGGTTTCGTCCGAGCTCAGGGAGACGCTGACAGTGCAGTTGATAGGCTCTGGCAGAAGAAGAAGGCCGAAGTTCGACAACAGTAG 366 0.4973 MTVYVCASANVAALLEWATAMHSIGELFFLFGVVETFAKMQNDEGQNMDLYIPRKCSATNRLITSKDHASVQINVGHVDESGIYTGHFTTFALCGFVRAQGDADSAVDRLWQKKKAEVRQQ* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01055 121 ProSitePatterns Ribosomal protein S21e signature. 50 58 IPR018279 GO:0003735|GO:0005840|GO:0006412
Eupl12g01055 121 Gene3D - 36 120 IPR038579 -
Eupl12g01055 121 PANTHER 40S RIBOSOMAL PROTEIN S21 40 120 IPR001931 GO:0003735|GO:0005840|GO:0006412
Eupl12g01055 121 FunFam 40S ribosomal protein S21 40 120 - -
Eupl12g01055 121 Pfam Ribosomal protein S21e 40 115 IPR001931 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01055 Eupl-Chr12 26787023 26794880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01055 40 120 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 81.481 8.10e-49 149