Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01042 ATGGAACCTCAATACCCTAAGCCTCGTCCGTACGGAAACGCCATGAAAGTGGCTATACCTCCGTCTCAATCGTCAGATAACGATCGGAGCAGTGGGGAAATACGAGCCCTAGACTGCAATCTCAATTCTCTCTGCGATCACATTCAAATGGAGGGCTTCAGTTCGGGCTCGTTCTCTGACATCGTTGTCCAGGTCATGGGCTCTACTTATCGTCTCCACCGTTTGATCATCTCTCGTAGTTCTTATTTCAGGAACATGCTTCATGGTCCGTGGAAAGAGGCCAATGAACCAATTGTGACCTTGCATGTTGATGATGATAATGTTAATGGGGAGGCGATTGCAATGGCCTTGGCATATCTTTATGGGCATCATCCTAAGCTTAATGATAGTAATGCATTTCGTGTTCTTGCTGCTGCATCCTTTCTTGACCTCCAGGATTTATGCTCAATTTGCACGGACTTCATCATATCTGAATTGTGGACCTCAAACTTCTTAGCATATCAGGTATTTGCAGAGAGTCAAGATTATGGCATACATGGAGAGCGTGTCAGAAATGCTTGCTGGGGCTACCTCTGTCAAAGTGGTGCCATGGAATTGAAAGAGGTGCTTCCAAAACTTTCTTCTCAAACTTTGCATGCCCTACTCACCTCGGACGAACTGTGGGTACCTAGTGAAGAGAAACGCTTTGAACTGGCGCTGTACACACTACTTGCGAAAGGTGCTTTTTTCAAGGCAGAACATCCTGAGAAAGGAAGTTCAAGTTCAGAGATGGGAACAAATGCTCATTCTGATTCGTCTGGAGTAAAGGGAAAGAATTTGATAGATATCAGCCCCAATAGGCGGCTAATAGAATCCGAACTAGGACACTTAAGTTCGAAGGATGATCATGAAGGCCTTAAAACTGCTCATAATATTCTGGTCGAGCTTGCGGACTATGTGGTAGACTTCCACACTGGGCCTCCTGATTCCAAACCACAACAAGTGAGACAAGCTGCATGCGCTCAATCGGAGTTGGAGCCAAGATTTTCTTGCAAGATGGAACAAGCTGCATCTTTGAGTAAATCACTTTCAGACCCAGATGGAATTAGAACATCCTGTGCTTATGTCGATATGTCAAATGGTGTTGAAGCAAACAGAATGGGGGGCAATGGAGTGGCTATGGAAGGACCATCTGAAGAAAGCACATGCTACCATTTAAACAACAATATTTGGTTTTCCAGAGACCAATCAAGGCAGTGCTTTTCTGCAACCTCTTCCTCTAATGGACTTATGCCCAATGAGTGGGGAAGATGCGGCATGCCTCCCCTTTCATGGGGTGGTAGGATTGTAGGCAGAAGACAAGTGAAAAGTTATGCTAAAGGGAACTGTGGGGTCCGCGATGAAGAATATGATGCATTTGTGAACATTTTTGAAGGGGGTTCTCTTTTATATTGTAATATGTCTTTCGAGGCACTTTTAAATGTGAGGAAGCAGCTTGAAGAATTAGGATTCCCTTGCAAGGCCGCGAATGATGGTCTTTGGCTACAGATGCTTCTAAGCCACAGGGTGCAAGAAATTGGTGCTGATACGTGCAAAAATTGTTGCCTTACGAGCATCGCCTGTGCATGTAGGCAGCCATATTCATTTTCACACGGAGCTGCTACCACAGGTTATTATATGCAAGAGAATGATCGGAACAATCCACCTGGAAGCATGGGGAATATATACATTGCTGATGCTGCTCAAAGTGAAGGAAATGGCCTCTTTAGGCCTGTAAGAGTGCATGTTAGGGGGCCTATAGATGGGCTTGCTGGTATTGGGCGGGGGACCACATTGGTGCCTGCAAATGCGGGTCCTCCAACACGTTTTGTCTTTTCTCGTGTCCCCTTTGGACTGGGCAACAGAAATTGCCAGCAGTCTATTGCTAACGATGAATCAGAGGCTAGAGCTGATCTCAATGGAGACCTGTCTGGGGATGGCTTGACGGCTTTGGTTGGGCTTAGCCAAGGTGGGAGCAATGTTGTTCCTCTTCATGGAGAGCAAACAGAGAGAGGGTATGAATCAGATTTGCAAAGCAGATTAGCTGGAGCTTCAGTTGCAGGGCCGAGTACTAGTGGTATTCCTGTGCAGATGCTACAGTCGCAGGAGCATGCCATTGGATTAGAGTGGGAAAATGCCGATGGCTCTTCTATATCCTTGGATATGAAAACACCTTTGCGTCGCTTCCCTCCTTTTCGCTTCGGGGTAGAATTTGAAGATGTGCATAGACTCTCTGATGGCCAAGTGAAGCACTCACCAGAAGTTTTTTATGCTGGTTCTTTATGGAAGGTTAGTGTTCAAGCGTTTAATGATGAAGACCCTCAAGGTCGCCGCACTCTTGGGTTATTTCTCCACCGACGTAAGGCAGAGATAACTGATTCCCTAAGAAAGGTTCTCGTGTACGTAGATTCTCGGGAAAAGGTTACGGCTCGTTATCAGTTGATTTGTCCATCGAAGAGAGAAGTTATGGTGTTCGGAAGCTTTAAACAGACTGGGACTCTGTTACCGAAAGCTCCCAAGGGATGGGGTTGGCGTACAGCTTTGTTATTCGACGAGCTCGCTGATCTCCTCCAAGGTGGGGCCTTGCGAGTGGCTGCTGTTGTGCAGCTTGTTTGA 2634 0.4636 MEPQYPKPRPYGNAMKVAIPPSQSSDNDRSSGEIRALDCNLNSLCDHIQMEGFSSGSFSDIVVQVMGSTYRLHRLIISRSSYFRNMLHGPWKEANEPIVTLHVDDDNVNGEAIAMALAYLYGHHPKLNDSNAFRVLAAASFLDLQDLCSICTDFIISELWTSNFLAYQVFAESQDYGIHGERVRNACWGYLCQSGAMELKEVLPKLSSQTLHALLTSDELWVPSEEKRFELALYTLLAKGAFFKAEHPEKGSSSSEMGTNAHSDSSGVKGKNLIDISPNRRLIESELGHLSSKDDHEGLKTAHNILVELADYVVDFHTGPPDSKPQQVRQAACAQSELEPRFSCKMEQAASLSKSLSDPDGIRTSCAYVDMSNGVEANRMGGNGVAMEGPSEESTCYHLNNNIWFSRDQSRQCFSATSSSNGLMPNEWGRCGMPPLSWGGRIVGRRQVKSYAKGNCGVRDEEYDAFVNIFEGGSLLYCNMSFEALLNVRKQLEELGFPCKAANDGLWLQMLLSHRVQEIGADTCKNCCLTSIACACRQPYSFSHGAATTGYYMQENDRNNPPGSMGNIYIADAAQSEGNGLFRPVRVHVRGPIDGLAGIGRGTTLVPANAGPPTRFVFSRVPFGLGNRNCQQSIANDESEARADLNGDLSGDGLTALVGLSQGGSNVVPLHGEQTERGYESDLQSRLAGASVAGPSTSGIPVQMLQSQEHAIGLEWENADGSSISLDMKTPLRRFPPFRFGVEFEDVHRLSDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDSLRKVLVYVDSREKVTARYQLICPSKREVMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQGGALRVAAVVQLV* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01042 877 SMART BTB_4 59 159 IPR000210 GO:0005515
Eupl12g01042 877 Gene3D Potassium Channel Kv1.1; Chain A 27 193 IPR011333 -
Eupl12g01042 877 Pfam BTB/POZ domain 53 157 IPR000210 GO:0005515
Eupl12g01042 877 ProSiteProfiles BTB domain profile. 59 129 IPR000210 GO:0005515
Eupl12g01042 877 MobiDBLite consensus disorder prediction 1 32 - -
Eupl12g01042 877 SUPERFAMILY POZ domain 53 157 IPR011333 -
Eupl12g01042 877 MobiDBLite consensus disorder prediction 252 270 - -
Eupl12g01042 877 MobiDBLite consensus disorder prediction 248 270 - -
Eupl12g01042 877 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 16 877 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Eupl12g01042 BTB 4.6e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01042 - - nnu:104598970 1483.77