Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01030 ATGTCTTCCTCCTCTGTTCCTTGGATCACCACCCTCTCATGTTCAAGCTCTATCATTCAATCCTCAGATAATACATCTACTCTCTCAGTTGTACTTCAATGGCTGAGATTCATCTCCCTCTCTCCATGTCCTCAACGAGCAGTTTTCTCCTCCATTGATCTCATCTTCTTGCTCGCCGTCGTCGTTTTTTCAATCCAAAAGCTATTTTCTAGAATCCGATCTCCCGACGATCCTAAGTCCTCCATTAACAAACCCCTCATTATAAATGCAAGAGCTCATATCAGAACTAATCTATGGTTCATGCTCTCTCTGATTCTAACAGCTTTGTTAGCAATCTTTCACACAATCCTTTGCATTATTGCCTTCACTAGAACAACCCAATCTTCATGGGAGGTAATCGAAGCTCTATATCGGTTGATTCAAGCAATTACCCATATAGCAATTGCAATTTTAATTGCTCATGAGAAGCGATTCGAATCCGTTACTCATCCGATATCACTTCGAATTTACTGGGTATTGAATTTCATTGTTGTTTCTTTGTTCACTGCTTCGGCGATCATTAGGCTGAGCTCTATCGAAGAAAATCAAGATTTCGAATTGAGAGTGGACGATATATTTTCCATAATTATGCTCCCAATATCTGCTATCCTTCTCTTTGTTGCCATTAGGGGATCAACTGGAATAACCAGAGAATCTGAATCATGTCCTGAATCGGAATCGAATACAACATGGTACGCTACGGCTTCTTTGTTCTCTAGAACTGGGTGGTTTTGGATGAATCCCATTATGAAAAAGGGCTATAAATCTGCTCTAAAGATCGAAGACGTTCCATCTCTAGCACCTGATCACAGCGCCGAGCGAATGTCGGAGCTTTTCGAGTTGAATTGGGCTAAATTAGATGACAAATCAAAGCACCCAGTTGGAAAAACATTGCTCCGGTGCTTCTGGAAGGAACTCGCCTTCACCGGCTTCCTCGCGATCGTTAAGCTCGGCGTCATGTACATGGGACCAATCCTTCTCCAAGGATTCGTCGATTTCACCGCTGGAAAGGGCAGTTCTATCTATGAAGGCTACTTCCTTGTTGCAGCCCTCCTGCTAGCAAAATTTGTTGAAGTCATAAGCTCACACCAATTCAATTTCCAGTCTCAGAAGGCTGGGATGTTAATTCGATCTACTCTGATCACATCTTTATATAAGAAAGGCCTACGACTATCGGGATCCGCCCGACAAACGCACGGGCTCGGGCAGATTGTGAATTACATGGCTGTGGATGCTCAGATGCTATCCGATTTGATGATGCAGCTACATTCAGTATGGCTAATGCCATTCCAAGTCGGCGTCGCATTAATCCTCCTCTACTTCTACCTTGGTATCTCAATGTTTTCAGCATTGCTTGGGATCATTGGTGTCATGGCTTTCGTAATGACGACGACATGCAAGAACACCCGGTTTCAATTCGGCGTGATGATGATGCGCGATGCAAGAATGAAAGCTACAAGCGAGATGCTTAATTTCATGCGGGTGATAAAATTCCAAGCATGGGAGGAGCATTTCAATAAGAGAATTCAGTCTATTCGAGACTCGGAATTCGGGTGGTTGACGAAATTCCTGATTTCTATCTCTTCTAACATGGTTGTGTTATGGGCTTCACCCGTGGTCATATCGACACTTGCATTCGGGACAGCGATTTTGTTAGGGTACCCACTTGATACGGGAACGGTCTTCTCGGCGACATCGGTGTTCAAGATCTTGCAAGAGCCGATACGGGGCTTCCCGCAGGCTTTGATTTCGATATCGCAAGCTATAATTTCGCTTGGGAGGTTGGATGGGTATATGACGAGTAGGGAATTGGAGGAAGGGGCAGTGGAGAGAGAGGAGGGATGTGGTGGTCGGACTGTTGTGGAGGTGAAAGGGGGTGTGTTTGGTTGGGATGATTCAAATGGGGAGGCTAATTTAAAAGATTTGAATTTGGTGATCAAGAAAGGAGAGCTTGCCGCTATTGTTGGGACCGTTGGATCGGGGAAGTCTTCGTTCCTTTCTTCGATTCTCGGTGAGATGCATAAGTTCTCGGGAAAGGTCAGAGTTTGTGGGACCACAGCCTATGTGGCACAGACATCATGGATCCAAAATGGGACCATCCAAGAAAACATTCTGTTTGGCTCGCCGATGAACACCCAGAAATACAGGGAAGCCATCAGAGTCTGTTGCCTGGAGAAGGACTTGGAAATGATGGAGTTTGGAGATCAGACGGAGATCGGTGAACGTGGTATTAATCTCAGTGGTGGTCAGAAGCAGAGGATACAGCTCGCGAGAGCCGTCTATCAGGACTGCGATATCTACCTTCTTGATGATGTCTTCAGCGCCGTTGATGCTCACACTGGATCAGAGTTATTCAAGGAATGTATAAGAGGAGCTCTTAAAGATAAAACCATTTTGCTTGTCACCCATCAAGTTGACTTCTTGCACAATGCGGATCTCATATTGGTGATGAGAGATGGAATGATTGTACAATCAGGAAAATATAACGAGCTTATTGAATCTGGCTTGGATTTTGGAGCACTTGTTGATGCTTATGAGAGTTCCATGGAGCTTGTAGAAAAGAGCACCAGTGAGTCCACCAATGAACCCCTGCAGCGACAAAAATCACTAAAACCCTCCTCTCCACACGTACGTGAAGCCAACGGAGACCAACCCAGTAAGTCCGAGAAGGGAACCTCGAAGCTGATCGAAGACGAGGAAAGAGAGACGGGCCACGTGAACTTACAAGTGTACGTCGCGTATGGTACGGAGGCGTTTGGGTGGTGGGGTATAGGAGGGGTGTTTCTGATGACGTTAGCTTGGCAGTTGTCCCTTATGTTGGGTGACTATTGGCTTTCATATGAAACTGCGGAGGATCATGCTGCTTCATTCAATCCTTCTTTTTTCATTTCTATATATGCAATCCTCGCAGCGATTTCTGTGTTGGTGGTGATCATTAGAGCTATTGTTGTCGCTGTTGTTGGGCTCAAGACTGCTCAGATCTTCTTCAAGCAGATTCTTAATAGCATCTTGCATGCTCCCATGTCATTCTTTGATACAACTCCTTCTGGAAGAATTCTTAGTCGGGCATCGTCAGATCAAGGCAACATCGATCTAATGCTTCCCTTTTTCTTGAGCATGACCATAGTCATGTACATCACACTTCTCAGCATCGTCGTCGTCACATGTCAGGTTCTTTGGCCGATGATTTTCCTCATAATTCCACTTGGTTGGTGCAACATCTGGTACCGGGGATACTACATCGCAACAAGCCGTGAGTTGACTCGCCTTGACTCAATCACAAAGGCCCCCATTATCCATCACTTCTCGGAAAGCGTTGCCGGGGTTATGACGATCCGGAGCTTCAAGAGACAGACAATGTTTTGTGAGGAGAATATTAAGAGAGTGAATACAAATTTGCGTATGGATTTCCACAATAATGGATCAAATGAGTGGTTGGGATTCCGTTTAGAATTGATTGGGAGTGTTGTCCTCTGCATTACTGCTTTATTCTTGGTCGTGCTGCCTAGTAGTGTCATCAAGCCAGAGTCTGTGGGGTTATGTCTCTCCTATGGTCTGTCTCTCAGTGGTGTGATGTACTGGACCACATATCTGAGCTGCATGGTAGAGAACAGAATGGTTTCAGTTGAGAGAATAAAACAATTCATAAACATTCCATCTGAAGCACCATGGAGGATCAAAGACTGCCTTCCTTCTCCGGATTGGCCTACCCACGGCGACGTCGATCTCAAGGACTTGCAGGTTCGATATCGACCCAACACTCCTCTAATTCTCAAAGGCATCACTCTTAGCATTCGAGGAGGAGAGAAGATTGGTGTTGTTGGTCGAACAGGGAGTGGGAAATCAACTTTGATCCAAGCATTCTTTAGGGTGATGGAGCCTTCAGGGGGGATGATAATCGTCGATGGGGTCAATATTTCCAAGCTAGGCCTTCATGATCTCAGGTCCCGTTTTGGAATCATTCCTCAAGAACCTGTCCTTTTCCAAGGAACCGTGCGAAGCAACATTGACCCAATTGGACTATATTCAGATGAAGAGATATGGAAGAGCCTTGAACGTTGCCAACTTAAAGATGTCGTGGCTGCAAAACCAGATAAACTTGATGCTTCAGGTATGATATCCTTAGGACACCGATCCCGATCCGGATCGGAGGGTAGATCGCTCGAGAAGAACAGTGTACCTCAGGCGAGACAACCCCATGTCAGATCATCTCGATGGCCACCGATCCCGGATCGGGTTCAGCCGAGACTTCGAACCATGGGTGGAAATGCAATATTTTTTTTACCTTCAAATCTGTGTTGTTACTCATGGTTGGCAAATTTTTTTCACTTGTCAGTGGTTGATAGTGGAGACAATTGGAGTGTGGGACAGAGGCAGCTTCTTTGTTTGGGAAGGGTGATGCTTAAGCGCAGTCGGATTTTGTTTATGGACGAAGCGACAGCTTCCGTTGATTCACAAACTGATGGTGTAATTCAAAAGATCATCCGAGAGGACTTCGCAGCCTGTACGATTATCAGCATTGCTCATAGAATACCCACAGTCATGGACTGTGATAGAGTGCTAGTTATAGATGCAGGTTGGGCGAAGGAGTTTGAGAAACCATCGCACTTGCTTGAGCGACCCTCGCTTTTTGGGGCATTGGTTCAGGAGTACGCCAATCGGTCTTCTGGTTTGTAG 4716 0.4557 MSSSSVPWITTLSCSSSIIQSSDNTSTLSVVLQWLRFISLSPCPQRAVFSSIDLIFLLAVVVFSIQKLFSRIRSPDDPKSSINKPLIINARAHIRTNLWFMLSLILTALLAIFHTILCIIAFTRTTQSSWEVIEALYRLIQAITHIAIAILIAHEKRFESVTHPISLRIYWVLNFIVVSLFTASAIIRLSSIEENQDFELRVDDIFSIIMLPISAILLFVAIRGSTGITRESESCPESESNTTWYATASLFSRTGWFWMNPIMKKGYKSALKIEDVPSLAPDHSAERMSELFELNWAKLDDKSKHPVGKTLLRCFWKELAFTGFLAIVKLGVMYMGPILLQGFVDFTAGKGSSIYEGYFLVAALLLAKFVEVISSHQFNFQSQKAGMLIRSTLITSLYKKGLRLSGSARQTHGLGQIVNYMAVDAQMLSDLMMQLHSVWLMPFQVGVALILLYFYLGISMFSALLGIIGVMAFVMTTTCKNTRFQFGVMMMRDARMKATSEMLNFMRVIKFQAWEEHFNKRIQSIRDSEFGWLTKFLISISSNMVVLWASPVVISTLAFGTAILLGYPLDTGTVFSATSVFKILQEPIRGFPQALISISQAIISLGRLDGYMTSRELEEGAVEREEGCGGRTVVEVKGGVFGWDDSNGEANLKDLNLVIKKGELAAIVGTVGSGKSSFLSSILGEMHKFSGKVRVCGTTAYVAQTSWIQNGTIQENILFGSPMNTQKYREAIRVCCLEKDLEMMEFGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSELFKECIRGALKDKTILLVTHQVDFLHNADLILVMRDGMIVQSGKYNELIESGLDFGALVDAYESSMELVEKSTSESTNEPLQRQKSLKPSSPHVREANGDQPSKSEKGTSKLIEDEERETGHVNLQVYVAYGTEAFGWWGIGGVFLMTLAWQLSLMLGDYWLSYETAEDHAASFNPSFFISIYAILAAISVLVVIIRAIVVAVVGLKTAQIFFKQILNSILHAPMSFFDTTPSGRILSRASSDQGNIDLMLPFFLSMTIVMYITLLSIVVVTCQVLWPMIFLIIPLGWCNIWYRGYYIATSRELTRLDSITKAPIIHHFSESVAGVMTIRSFKRQTMFCEENIKRVNTNLRMDFHNNGSNEWLGFRLELIGSVVLCITALFLVVLPSSVIKPESVGLCLSYGLSLSGVMYWTTYLSCMVENRMVSVERIKQFINIPSEAPWRIKDCLPSPDWPTHGDVDLKDLQVRYRPNTPLILKGITLSIRGGEKIGVVGRTGSGKSTLIQAFFRVMEPSGGMIIVDGVNISKLGLHDLRSRFGIIPQEPVLFQGTVRSNIDPIGLYSDEEIWKSLERCQLKDVVAAKPDKLDASGMISLGHRSRSGSEGRSLEKNSVPQARQPHVRSSRWPPIPDRVQPRLRTMGGNAIFFLPSNLCCYSWLANFFHLSVVDSGDNWSVGQRQLLCLGRVMLKRSRILFMDEATASVDSQTDGVIQKIIREDFAACTIISIAHRIPTVMDCDRVLVIDAGWAKEFEKPSHLLERPSLFGALVQEYANRSSGL* 1572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01030 1571 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 634 857 IPR003439 GO:0005524
Eupl12g01030 1571 CDD ABC_6TM_ABCC_D1 321 608 IPR044746 GO:0140359
Eupl12g01030 1571 ProSitePatterns ABC transporters family signature. 759 773 IPR017871 GO:0005524|GO:0016887
Eupl12g01030 1571 Gene3D ABC transporter type 1, transmembrane domain 309 614 IPR036640 GO:0005524|GO:0016020
Eupl12g01030 1571 Gene3D ABC transporter type 1, transmembrane domain 899 1235 IPR036640 GO:0005524|GO:0016020
Eupl12g01030 1571 MobiDBLite consensus disorder prediction 865 911 - -
Eupl12g01030 1571 Gene3D - 615 883 IPR027417 -
Eupl12g01030 1571 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 320 600 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl12g01030 1571 FunFam ATP-dependent bile acid permease, putative 1238 1391 - -
Eupl12g01030 1571 Pfam ABC transporter transmembrane region 321 587 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl12g01030 1571 Pfam ABC transporter transmembrane region 965 1195 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl12g01030 1571 MobiDBLite consensus disorder prediction 1389 1412 - -
Eupl12g01030 1571 SUPERFAMILY ABC transporter transmembrane region 936 1234 IPR036640 GO:0005524|GO:0016020
Eupl12g01030 1571 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1254 1563 IPR003439 GO:0005524
Eupl12g01030 1571 Gene3D - 1238 1561 IPR027417 -
Eupl12g01030 1571 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 939 1217 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl12g01030 1571 SUPERFAMILY ABC transporter transmembrane region 310 613 IPR036640 GO:0005524|GO:0016020
Eupl12g01030 1571 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 246 1565 - -
Eupl12g01030 1571 MobiDBLite consensus disorder prediction 865 884 - -
Eupl12g01030 1571 SMART AAA_5 661 842 IPR003593 GO:0016887
Eupl12g01030 1571 SMART AAA_5 1280 1539 IPR003593 GO:0016887
Eupl12g01030 1571 FunFam ABC transporter C family member 4 617 876 - -
Eupl12g01030 1571 FunFam ABC transporter C family member 5 900 1235 - -
Eupl12g01030 1571 CDD ABCC_MRP_domain2 1252 1547 - -
Eupl12g01030 1571 Pfam ABC transporter 652 785 IPR003439 GO:0005524
Eupl12g01030 1571 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 634 855 IPR027417 -
Eupl12g01030 1571 MobiDBLite consensus disorder prediction 1386 1422 - -
Eupl12g01030 1571 CDD ABCC_MRP_domain1 634 833 - -
Eupl12g01030 1571 CDD ABC_6TM_ABCC_D2 940 1229 IPR044726 GO:0140359
Eupl12g01030 1571 FunFam ABC transporter C family member 10 303 616 - -
Eupl12g01030 1571 MobiDBLite consensus disorder prediction 895 911 - -
Eupl12g01030 1571 Pfam ABC transporter 1271 1393 IPR003439 GO:0005524
Eupl12g01030 1571 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1229 1558 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01030 Eupl-Chr12 26497586 26512436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01030 631 850 Calmodulin-binding Proteins AT2G36910 32.051 9.91e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01030 - K05666 nnu:104598966 1926.37