Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01024 ATGAAGTCATGGTGTGAGGATTGGAATCCTGTAACCTTTGGTGGGAAGTACTATAACCATGAAGTGAGTGGAGATAGGGAAGTGCAGAGGACAATGTTGGAATTACTCAATCAACTAGATGGCTTTAGCAGTGATGACCACATAAAAGTCACAGCAGCAACAAATCGAGCTGATATCCTGGATCCTGCTCTCATGCGTTCAGGTCGTTTGGATCGCAAAATTGAGTTCCCCCACCCTACTGAAGAAGCAAGAGCTCGAATCTTGCAGATCCATTCAAGAAAAATGAATGTACACCCGGATGTAAATTTTGAAGAGCTAGCTCGCTCAACAGATGATTTCAATGGAGCTCAGCTGAAAGCAGTTTGTGTAGAGGCTGGCATGCTGGCTCTCCGTCGAGATGCAACCGAGGTAATCCATGAAGATTTCAACGAAGGAATCATCCAAGTTCAGGCAAAGAAGAAATCCAGCTTGAATTATTATGCATAG 486 0.4403 MKSWCEDWNPVTFGGKYYNHEVSGDREVQRTMLELLNQLDGFSSDDHIKVTAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVIHEDFNEGIIQVQAKKKSSLNYYA* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01024 161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 144 IPR027417 -
Eupl12g01024 161 Pfam AAA+ lid domain 100 144 IPR041569 -
Eupl12g01024 161 FunFam 26S protease regulatory subunit 6A 80 154 - -
Eupl12g01024 161 Gene3D - 12 79 IPR027417 -
Eupl12g01024 161 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 13 154 - -
Eupl12g01024 161 Gene3D - 83 161 - -
Eupl12g01024 161 Pfam ATPase family associated with various cellular activities (AAA) 24 77 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01024 Eupl-Chr12 26425369 26434426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01024 24 132 Calmodulin-binding Proteins AT3G56690 45.455 2.96e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01024 K03065 - msin:131231008 276.944