Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01015 ATGACGACAAGTTTATGCATTTTTGTAATGTTCATACTCCTTGTCTGTATGACACACCAGGGTAAATCGACATCCGAGAGTGGAGATGACTACGTTAGGGACGCATGCAGTGTGACACAGTACCGTGACCTATGCATCCACTCGCTAGCCTCGTTTTCCAATTCAGCAAAGCGGAGCCCTAGAAGGTGGGCACGAGCAGCTGTGTCCGTCACACTAGGTGAGGCTAAGAGTGTTGCGCAATACTTATGGAAACTGAAGGAGAGTGGACGCATGAGACGGAGGCAGCAGATAGCCCTCTCGGACTGCATTGAGTGCTTCCAAGACACCATCGACGATCTTCAAAATTCACTTGCTGAGCTTAGGAGATTGGACACAAAAGCGTTTGATACACAGATGGGGAACATTGAGACATGGATGAGTGCTGCTTTAACTTACGAGGATACTTGCTTAGATGGGTTTGATGGTCGAAAGGGGCAGCAGGTAAGGATGCTTCACAATAAGGTGTTGAATGTTACTTATTTCACGAGTAACGCCCTCGCTCTTGTTAATAAACTAGCATCGGTTGGTGGATGA 573 0.4729 MTTSLCIFVMFILLVCMTHQGKSTSESGDDYVRDACSVTQYRDLCIHSLASFSNSAKRSPRRWARAAVSVTLGEAKSVAQYLWKLKESGRMRRRQQIALSDCIECFQDTIDDLQNSLAELRRLDTKAFDTQMGNIETWMSAALTYEDTCLDGFDGRKGQQVRMLHNKVLNVTYFTSNALALVNKLASVGG* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01015 190 Coils Coil 103 123 - -
Eupl12g01015 190 CDD PMEI-like_3 35 187 - -
Eupl12g01015 190 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 187 IPR035513 -
Eupl12g01015 190 FunFam Pectinesterase inhibitor 3 27 186 - -
Eupl12g01015 190 PANTHER PECTINESTERASE INHIBITOR-LIKE 6 181 - -
Eupl12g01015 190 Pfam Plant invertase/pectin methylesterase inhibitor 31 181 IPR006501 GO:0004857
Eupl12g01015 190 NCBIfam pectinesterase inhibitor domain 2 185 IPR006501 GO:0004857
Eupl12g01015 190 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 186 IPR035513 -
Eupl12g01015 190 SMART PMEI_2 27 181 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01015 Eupl-Chr12 26317419 26318550 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01015 20 190 Carbohydrate Esterase AT3G05610 27.586 5.05e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01015 - - vvi:100263994 243.047