Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01010 ATGAGTCGAGGGAGCGCAGCGGGTCCCAAGGGGAAGAAGAAGGGATCAACATTCGTAATCGACTGTGGAAAGCCGGTGGAGGATAAGATCATGGACATCGCCTCACTGGAGAAGTTCCTCCAAGAGAGGATCAAGGTCGGCGGTAAGGCCGGCGCTCTCGGTGACGTCGTTAGCGTCGCACGTGACAAGAACAAAATCACCGTTACCTCCGACAGCAACTTCTCTAAGCGGTATCTGAAGTACTTGACAAAGAAATACTTGAAGAAGCACAATGTGCGAGACTGGCTTCGGGTGATTTCTTCCAACAAAGACCGAAATGTTTATGAGTTGCGGTACTTCAACATTGCCGAGAATGAGGGGGAGGAAGAGGATTGA 375 0.5067 MSRGSAAGPKGKKKGSTFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDVVSVARDKNKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVISSNKDRNVYELRYFNIAENEGEEED* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01010 124 PANTHER 60S RIBOSOMAL PROTEIN L22 3 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Eupl12g01010 124 FunFam 60S ribosomal protein L22-2 5 124 - -
Eupl12g01010 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
Eupl12g01010 124 Gene3D - 6 124 IPR038526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01010 Eupl-Chr12 26263719 26267180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01010 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 83.065 1.21e-63 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01010 K02891 - msin:131225103 216.853