Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01002 ATGATGATGACGATGGAGGGGACGATGGATGGAGCTGTGTTGGACGACATCATACGAAGGCTTCTAGAAGGCAAAGGAGGGAAACAGGTCCAGTTGTCGGAGGGTGAGATTCGGCAGCTATGCGTCAACTCTCGCCACGTCTTCCTCTCTCAGCCCAATCTCCTCCAACTCCGCCCTCCCATCAAGATCTGCGGTGATATACATGGGCAATACCAAGACCTTGTGAGGATGTTTGAACACAATGGCTTCCCTCCTGCTGGAAACTATCTCTTTCTCGGAGATTATGTAGATCGAGGCAAGCAAAGCTTAGAGACAATCTGTTTGCTTCTTGCCTACAAAATTAGGTATCCTGACAAAATTTTTCTCTTGAGGGGAAACCATGAAGATGCAAAAATCAATAGGGTTTATGGGTTCTATGACGAGTGTAAAAGGAGGTTTAACGTTCGGCTCTGGAAGATATTCACTGACTGCTTTAATTGCCTGCCTGTGGCTGCGCTCATCGATGAAAAGATACTTTGCATGCATGGGGGTCTCTCTCCAGAGTTGCATAATGTGAATCAAATAAGGGATATCAAGAGGCCCACTGAGATCCCAGAGTATGGTCTCCTATGCGATTTGCTTTGGTCTGATCCTGATCCCAGAGTCGAGGGGTGGGCAGAGAATGATCGAGGCGTGTCATGTACCTTTGGAGCTGATAGAGTTGCTGAGTTCTTGAAGAAGAATGATCTCGACCTTGTATGCCGGGGTCATCAGGTGGTGGAGGATGGATATGAATTCTTTGCTAAAAGGAGACTAGTCACAATATTTTCGGCTCCAAACTACGGTGGAGAGTTCGATAATGTAGGTGCTCTTTTGAGCGTCAATGAAGCTCTAATGTGCTCTTTCGAGATCATGAAACCGGTCGAAAATGTACCAACATTGTGCAGTGCTAGTTCTTCTGGATTAACTCTGAAGAAGTTACCTAAAAAGTTTTGA 975 0.4595 MMMTMEGTMDGAVLDDIIRRLLEGKGGKQVQLSEGEIRQLCVNSRHVFLSQPNLLQLRPPIKICGDIHGQYQDLVRMFEHNGFPPAGNYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIFLLRGNHEDAKINRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPELHNVNQIRDIKRPTEIPEYGLLCDLLWSDPDPRVEGWAENDRGVSCTFGADRVAEFLKKNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNVGALLSVNEALMCSFEIMKPVENVPTLCSASSSGLTLKKLPKKF* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01002 324 CDD MPP_PP1_PPKL 13 300 - -
Eupl12g01002 324 PRINTS Serine/threonine phosphatase family signature 89 116 IPR006186 GO:0016787
Eupl12g01002 324 PRINTS Serine/threonine phosphatase family signature 122 146 IPR006186 GO:0016787
Eupl12g01002 324 PRINTS Serine/threonine phosphatase family signature 242 262 IPR006186 GO:0016787
Eupl12g01002 324 PRINTS Serine/threonine phosphatase family signature 185 212 IPR006186 GO:0016787
Eupl12g01002 324 PRINTS Serine/threonine phosphatase family signature 60 87 IPR006186 GO:0016787
Eupl12g01002 324 PRINTS Serine/threonine phosphatase family signature 156 182 IPR006186 GO:0016787
Eupl12g01002 324 PRINTS Serine/threonine phosphatase family signature 264 280 IPR006186 GO:0016787
Eupl12g01002 324 Pfam Calcineurin-like phosphoesterase 60 252 IPR004843 GO:0016787
Eupl12g01002 324 SUPERFAMILY Metallo-dependent phosphatases 27 303 IPR029052 -
Eupl12g01002 324 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 17 302 - -
Eupl12g01002 324 ProSitePatterns Serine/threonine specific protein phosphatases signature. 123 128 IPR006186 GO:0016787
Eupl12g01002 324 FunFam Serine/threonine-protein phosphatase 5 308 - -
Eupl12g01002 324 Pfam Serine-threonine protein phosphatase N-terminal domain 14 58 IPR031675 -
Eupl12g01002 324 SMART pp2a_7 32 302 IPR006186 GO:0016787
Eupl12g01002 324 Gene3D - 8 308 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01002 Eupl-Chr12 26181271 26187228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01002 61 248 Calmodulin-binding Proteins AT5G63870 31.250 1.66e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01002 K06269 - nnu:104598919 580.867