Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00979 ATGAACTCGAACTGGGGAAAACCGAGTAATCCACAAAGAGGATCGGCTCCTCAAAACAACTACGAGTTCGATTTCGATCTCGGCTCTGGTCTCTCCAACAATCGCAGATCTCTAAAAGACCAAAAACAACAGACCTCTCCCTATTCTTTTCCTTCTTCTTCTTCTTCTTCCTCTGCACAATCGAAACCTGCACCGTCGTCGACTTCTTGGGCCCCGAACAAACCCACATGGACTCACCAGCCGTCTCCGAGTCAAACAGCTCGACCGGCGGTATCGAACCCTACCCCTATGGTTGGAGATATCTTTGGGAAGAGTTGGGCCTCGACAACTCCTTCTCGTCCCATGGCCGGTCTTGGAATTTTGGAAAAGAACCCGAATTTGTTCGGAGACCTTGTCGGTTCGGCTCTTGGGCAAGGTAAAAGTAACAGTAATGTTCCATTGAAGAACGCAGCACCGGTATCGGCACCATCACCAGCCAAGAGTTCTTATTCAATGGGGAATTTGGGAGATTCTCTCCCGAAAACCAATACGCCTATCAAGAACACCACTTCGGGATCTGCTGAGAATTTAGGGAGTTATTCAACTGTTAACAATAAGAGTAACATTGGGAATCTTGGCGGTCCGTCAATGAGAAGTGGAGCCCCGGCAAGCATGAACAAGGACCCATTTGGGTCTTTGGTGGATTTTGCATCTAAGAAGGATCCCGCTGTTAATGTTAATGTTAATGCCGCAGCAAGAAACGGTAACAGTACTGGTGACTCTTCCTTTGGAGCTTTCCAGAATGCTACGAAATCAAGCACTCCATCATTTCCGTCTGATCAATTTCCGGCCAACAATAACAATTCCATGGGATCAAAATCTGCTTCTGGTTCGCAAATGGATAGTTTTGGGGATTTCGGGATTCCGAATCAAGATTTTGCTTTTCAGAAACAGCCTCCTCCCAAATCCAATACCATTGATCCACTCGATATGTTGTTCTCGTCATCATCTGCCTCAGCAGCAGCAGCTCCAGCTGCATCTGAAGCTCCTGGAAATCAGCCATTTTCTGAGATGGACGATTGGGGATTGGATTCAGAGTTTGGAGGAAATGATATGGGTGGTACAACGACTGAGCTTGATGGGCTTCCGCCACCTCCAGCTGGGGTCACAGCTTCAGCAGCAAAGAACAAGGGACTAGATAATTACAAGCAGGGGCAGTATCCTGATGCCATAAAGTGGCTGTCTTGGGCGGTAGTGCTACTAGAGAAAGCTGGCGATAGTGCCGCCACTTTGGAAGTTTTATCGTGCAGAGCTTCATGTTACAAAGAAGTTGGGGAGTATAAAAAAGCCGTTGCTGACTGTTCAAAGGTGCTAGAACACGATAGTTCAAATGTATCTGTCCTGCTACAGCGTGCACTCCTGTACGAGAGCACCGAAAAATACAAACTTGGGGCTGAGGACCTAAGGACAGTTCTGAAGATTGATCCTGGTAACAGACTTGCAAGAAGTACCATTCACCGTCTGACTAAATTGTCCTCTTAG 1521 0.4721 MNSNWGKPSNPQRGSAPQNNYEFDFDLGSGLSNNRRSLKDQKQQTSPYSFPSSSSSSSAQSKPAPSSTSWAPNKPTWTHQPSPSQTARPAVSNPTPMVGDIFGKSWASTTPSRPMAGLGILEKNPNLFGDLVGSALGQGKSNSNVPLKNAAPVSAPSPAKSSYSMGNLGDSLPKTNTPIKNTTSGSAENLGSYSTVNNKSNIGNLGGPSMRSGAPASMNKDPFGSLVDFASKKDPAVNVNVNAAARNGNSTGDSSFGAFQNATKSSTPSFPSDQFPANNNNSMGSKSASGSQMDSFGDFGIPNQDFAFQKQPPPKSNTIDPLDMLFSSSSASAAAAPAASEAPGNQPFSEMDDWGLDSEFGGNDMGGTTTELDGLPPPPAGVTASAAKNKGLDNYKQGQYPDAIKWLSWAVVLLEKAGDSAATLEVLSCRASCYKEVGEYKKAVADCSKVLEHDSSNVSVLLQRALLYESTEKYKLGAEDLRTVLKIDPGNRLARSTIHRLTKLSS* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00979 506 MobiDBLite consensus disorder prediction 335 386 - -
Eupl12g00979 506 PANTHER OS03G0340700 PROTEIN 1 504 - -
Eupl12g00979 506 SMART tpr_5 458 491 IPR019734 GO:0005515
Eupl12g00979 506 SMART tpr_5 424 457 IPR019734 GO:0005515
Eupl12g00979 506 SMART tpr_5 384 417 IPR019734 GO:0005515
Eupl12g00979 506 MobiDBLite consensus disorder prediction 143 192 - -
Eupl12g00979 506 MobiDBLite consensus disorder prediction 1 97 - -
Eupl12g00979 506 MobiDBLite consensus disorder prediction 25 92 - -
Eupl12g00979 506 SUPERFAMILY TPR-like 384 498 IPR011990 GO:0005515
Eupl12g00979 506 MobiDBLite consensus disorder prediction 244 294 - -
Eupl12g00979 506 Gene3D Tetratricopeptide repeat domain 382 504 IPR011990 GO:0005515
Eupl12g00979 506 MobiDBLite consensus disorder prediction 1 19 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00979 384 501 Calmodulin-binding Proteins AT3G25230 32.031 4.54e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00979 - - nnu:104598892 644.039