Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00972 ATGTGCGGTGGTACTATCATTGCCGACTTCCTCCCTCGAAACCGCGGTCGCGACGTCTCCTCTTCCGACCTCCGGCCCAATTCCCCTGTCACTAAAGTTGACAATTTCGACTCCGAATTACACTCAGGTAGCCATGACGAATCCCTCAACAGAAGGGCTTCTCCTTCAGTTGATAGGAGTGGTGAGAACAACGGCAAAAGGAAGCGAAAGAATCTATACAGAGGAATTCGACAAAGACCATGGGGGAAATGGGCGGCAGAAATTCGAGACCCAAGAAAAGGGGATCGGGTTTGGTTGGGTACCTTTAAAACCGCTGAAGAGGCTGCGAGGGCTTATGATAAGGAGGCAAGGAAGATAAGGGGCAAGAAAGCCAAGGTTAATTTCCCCAACGAAGAAGATCAATATTTTGAAAAACCCCAGATACCCACTTATCGAAATCCAAATCCTTCTTATCAAGGCTACGTTAATCTCTCGAAAGGTTCGGATTTTGGGCTTCCCAACGATCTCAACCGGATTGCAGCATTTCCGGCCGATGGGTTTTACAGTTCTAATGAGGAAATATCAGGGTCTGGATTAGAGGGTGGTGATTCTTCGATGGGTTTGATGGGTGGTGGTGATACTCGTATTGGTCTGCTGAAAGTGAAAGAAGCAAAGAAGCAGAAGGTAGTGAACGAAGCAGAGAGAGAGGAGCTGATGGCGTTGGAATCGTACATGAAGTTCTATCAGATTCCGGCTCTGGACGGCCGTGTTGAGCAGTCAATGGCGTCGAATCCTGTTCAGCAGAGCGTCGTTGGCGATGCTTCCATGGAGTGA 813 0.4871 MCGGTIIADFLPRNRGRDVSSSDLRPNSPVTKVDNFDSELHSGSHDESLNRRASPSVDRSGENNGKRKRKNLYRGIRQRPWGKWAAEIRDPRKGDRVWLGTFKTAEEAARAYDKEARKIRGKKAKVNFPNEEDQYFEKPQIPTYRNPNPSYQGYVNLSKGSDFGLPNDLNRIAAFPADGFYSSNEEISGSGLEGGDSSMGLMGGGDTRIGLLKVKEAKKQKVVNEAEREELMALESYMKFYQIPALDGRVEQSMASNPVQQSVVGDASME* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00972 270 FunFam Ethylene-responsive transcription factor 2 71 131 - -
Eupl12g00972 270 CDD AP2 73 130 IPR001471 GO:0003700|GO:0006355
Eupl12g00972 270 MobiDBLite consensus disorder prediction 21 37 - -
Eupl12g00972 270 Coils Coil 214 234 - -
Eupl12g00972 270 SMART rav1_2 72 135 IPR001471 GO:0003700|GO:0006355
Eupl12g00972 270 Gene3D AP2/ERF domain 72 130 IPR036955 GO:0003700|GO:0006355
Eupl12g00972 270 ProSiteProfiles AP2/ERF domain profile. 72 129 IPR001471 GO:0003700|GO:0006355
Eupl12g00972 270 PANTHER DNA-BINDING DOMAIN 55 196 IPR044808 GO:0003700|GO:0009873
Eupl12g00972 270 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Eupl12g00972 270 PRINTS Ethylene responsive element binding protein signature 95 111 IPR001471 GO:0003700|GO:0006355
Eupl12g00972 270 MobiDBLite consensus disorder prediction 15 73 - -
Eupl12g00972 270 SUPERFAMILY DNA-binding domain 72 130 IPR016177 GO:0003677
Eupl12g00972 270 MobiDBLite consensus disorder prediction 38 53 - -
Eupl12g00972 270 Pfam AP2 domain 73 121 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00972 Eupl-Chr12 25828745 25830273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00972 1 132 AP2-EREBP Transcription Factor Family AT2G47520 57.576 3.90e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl12g00972 AP2 9.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00972 K09286 - nnu:104598888 272.322