Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00966 ATGTCATCAGAGGAATTCATGTCAGGTGGTGGACCCCGCTATGTTCAAATGCAATCAGAGCCGTTGCCTTCGTCGATGATATCGTCTCTTCACTCGTTCCGTCAGGGCTCGGAACCCACTTGGATTTTCGAAGAATTGCCGAAGGCAACGATCGTTTCCGTTTCTCGCCCAGATGCCGGAGATATTAGCCCCATGCTTCTATCTTACACCATCGAATTCCAATATAAACAGTTCAAATGGCGCTTACTGAAGAAAGCTTCACAAGTGATTTATTTACACTTTGCATTGAAGAAACGGGCAATTGTCGAGGAATTCCAAGAGAAACAAGAGCAGGTTAAAGAATGGCTTCAAAACCTTGGAATAGGAGATCACACAGCAGTTGTGCAAGATGATGATGAGGCCGATGATGAGACTGTTCATTTGCATCATGATGAAAGTGCTAAAAACAGAGATGTTCCGTCTAGTGCCGCTTTGCCAATCATTCGCCCAGCACTAGGAAGGCAGCAGTCTATTTCGGACAGAGCAAAGGTGGCTATGCAAGGTTATTTGAATCACTTTATGGGAAACATGGATATTGCAAACTCTAGAGAGGTTTGCAAGTTTTTGGAGGTCTCCAAGTTATCATTTGCACCAGAGTACGGGCCCAAGCTTAAAGAAGACTATGTAATGGTGAAGCATCTACCCAAAATTCTGAAAGATGATGACGAAAGAAAATGTTGCATATGCCATTGGTGTAGTTGTTGTAATGACAATTGGCAAAAGGTCTGGGCTGTATTGAAACCTGGGTTCTTGGCCTTGCTGGAAGATCCTTTTGATACCAAACTTTTAGATATAATCGTTTTTGATGTACTACCAACCTCAGATGGAAATGGAGAAGGCCGAGTATCCTTAGCAAAAGAACTAAAGGAACGTAACCCTTTACGTTATGCATTTAAGGTGTCTTGCGGAAGTCGGAGCATTAAGTTAAGAACTAAAAGTAACGCTAAAGTTAGAGATTGGGTTGCTGCAATTAATGATGCTGGATTAAGGCCTCCTGAGGGCTGGTGCCATCCTCACCGCTTTGGTTCTTTTGCTCCTCCAAGGGGTTTGACTGAAGATGGTAGTCAGGCTCAATGGTTTGTAGATGGGCAAGCTGCATTTGAAGCAATTGCTTCGGCGATCGAAGAAGCAAAGTCAGAGATATTCATTACTGACTGGTGGCTGTGCCCAGAACTGTATCTACGACGCCCTTTTGATGCTCATGGGTCCTCTCGGCTCGATGCTATACTGGAAGCAAAAGCTAAGCAAGGGGTTCAGATTTACATTCTTCTCTACAAGGAAGTTGCTCTTGCTTTGAAGATCAACAGTGTCTATAGTAAGCAAAGGCTTCTTAACATTCATGAGAATGTGAGAGTATTGCGTTATCCTGACCACTTCTCAACGGGCGTTTACCTATGGTCCCATCATGAAAAACTTGTTATTGTTGATTACCGGATTTGCTTTATTGGAGGACTTGATCTATGCTTTGGCCGTTATGACACCTTTGAACACAAAGTGGGTGATTGTCCTCCTCTGATATGGCCTGGAAAGGACTATTATAACCCTAGGGAATCTGAACCAAATTCTTGGGAAGATACAATGAAAGATGAATTGGACCGGAGGAGTTATCCTCGCATGCCGTGGCATGATGTCCATTGTGCTCTCTGGGGACCACCTTGTCGTGATGTTGCAAGGCACTTTGTTCAGCGCTGGAACTATGCAAAGAGAAATAAAGCTCCCAATGAACAAGCAATTCCACTACTTATGCCTCAGCAGCACATGGTTATTCCGCATTACATGGGAAGAAGCACAGAAATGGAGTCTGAAAGTAAGAAAGTGGAAGACAATCATAAAGACATAAAAAGACAGGATTCCTTTTCCTCCCGATCATCATTTCAAGACATCCCATTGCTTTTGCCTCAAGAGGCTGATGGACCAGATGCTGCCAATGGAAACCCAAACTTAAATGGCTTGAACATGACTCACAGTGTTCTTGATCAATCGAGCAGGATCAGTCGAAGTCTTTCGTTCTCTTTCCGGAAGTCTAAAGCTGAACCTTTAGTTCCAGATTTGCAGATGAAAGGCTTTGTAGATGAACATGATTTCACGTATATGCAGAGGGAAATGTCTTTGGATGGGGTAGCACTGTCAGGCATGCAAAATTCAGATAAGGAGTGGTGGGAAGCACAAGAACGGGATGATCAGGTTATTTCTGCAGATGAAGCTGGACAAGTTGGTCCTTGCACCTCATGTCGTTGTCAGGTTATTAGAAGTGTTGGCCAGTGGTCTGCTGGAACAAGCCAAACTGAAGGGAGCATTCACAATGCTTATTGCTCTCTTATTGAGAAAGCAGAATACTATATTTACATTGAGAATCAATTTTTCATATCAGGTCTTTCAGGAGATGAGATAATACAGAATCGTGTCTTAGAAGCATTGTACAAACGTATAGAGCGAGCATACAAAGAACAGAAGTGTTTCAGGGTTATTATTGTCATACCTCTCTTACCCGGCTTCCAGGGGGGTCTGGATGATGGCGGAGCGGCATCTGTGAGAGCCATAATGCACTGGCAATATCGAACCATTTGCAGAGGAAAAAATTCAATATTGCATAATCTTTATGATCTGATTGGTGCTAGAACACAAGATTACATTTCTTTCTACGGTCTCAGAGCTTATGGTAGACTTTCTGATGGTGGTCCTGTGGCTACCAGTCAGGTGTATGTGCACAGTAAAGTGATGATAATTGATGATCGTATCGCCTTGATTGGATCAGCTAATATAAATGATAGGAGTTTGCTTGGATTAAGAGACTCTGAGATTGGTGTACTTATTGAAGATAAAGAATTTTTCAATTCATCCATGAATGGAAAACCTTGGAAGGCTGGCAAATTTGCTTTTAGTCTCCGCCTGTCCCTATGGTCTGAACACCTTGGTCTTCATGCTGGAGAGATCAGTCAAATCGGTGACCCTGTGGTTGATACGACATACAAAAATATTTGGATGTCAATTGCAAAGACAAATACCATGATCTACCAAGATGTCTTTGCATGCATCCCCAATGATCTTATACACTCCAGATCTGCGATCAGACAAAGCATGGTATACTGGAAGGAGAAGCTAGGGCATACAACCATTGATTTAGGGATAGCCCCGGAGAAGCTAGAATCTTATCAGAATGGAGATCTCAAGGCCACAGATCCCATGGAAAGATTAGAGTCAGTGAGGGGGCATCTTGTGTCATTCCCCTTAGATTTTATGTGCCAAGAAGATTTGAGACCAGTGTTCAATGAGAGTGAGTATTATGCCTTTTCTCAAGTCTTTCACTAA 3348 0.4289 MSSEEFMSGGGPRYVQMQSEPLPSSMISSLHSFRQGSEPTWIFEELPKATIVSVSRPDAGDISPMLLSYTIEFQYKQFKWRLLKKASQVIYLHFALKKRAIVEEFQEKQEQVKEWLQNLGIGDHTAVVQDDDEADDETVHLHHDESAKNRDVPSSAALPIIRPALGRQQSISDRAKVAMQGYLNHFMGNMDIANSREVCKFLEVSKLSFAPEYGPKLKEDYVMVKHLPKILKDDDERKCCICHWCSCCNDNWQKVWAVLKPGFLALLEDPFDTKLLDIIVFDVLPTSDGNGEGRVSLAKELKERNPLRYAFKVSCGSRSIKLRTKSNAKVRDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGLTEDGSQAQWFVDGQAAFEAIASAIEEAKSEIFITDWWLCPELYLRRPFDAHGSSRLDAILEAKAKQGVQIYILLYKEVALALKINSVYSKQRLLNIHENVRVLRYPDHFSTGVYLWSHHEKLVIVDYRICFIGGLDLCFGRYDTFEHKVGDCPPLIWPGKDYYNPRESEPNSWEDTMKDELDRRSYPRMPWHDVHCALWGPPCRDVARHFVQRWNYAKRNKAPNEQAIPLLMPQQHMVIPHYMGRSTEMESESKKVEDNHKDIKRQDSFSSRSSFQDIPLLLPQEADGPDAANGNPNLNGLNMTHSVLDQSSRISRSLSFSFRKSKAEPLVPDLQMKGFVDEHDFTYMQREMSLDGVALSGMQNSDKEWWEAQERDDQVISADEAGQVGPCTSCRCQVIRSVGQWSAGTSQTEGSIHNAYCSLIEKAEYYIYIENQFFISGLSGDEIIQNRVLEALYKRIERAYKEQKCFRVIIVIPLLPGFQGGLDDGGAASVRAIMHWQYRTICRGKNSILHNLYDLIGARTQDYISFYGLRAYGRLSDGGPVATSQVYVHSKVMIIDDRIALIGSANINDRSLLGLRDSEIGVLIEDKEFFNSSMNGKPWKAGKFAFSLRLSLWSEHLGLHAGEISQIGDPVVDTTYKNIWMSIAKTNTMIYQDVFACIPNDLIHSRSAIRQSMVYWKEKLGHTTIDLGIAPEKLESYQNGDLKATDPMERLESVRGHLVSFPLDFMCQEDLRPVFNESEYYAFSQVFH* 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00966 1115 CDD PLDc_vPLD1_2_yPLD_like_2 771 955 - -
Eupl12g00966 1115 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 477 504 IPR001736 GO:0003824
Eupl12g00966 1115 FunFam Phospholipase 745 965 - -
Eupl12g00966 1115 PIRSF PLD_euk 48 629 IPR016555 GO:0004630|GO:0006654|GO:0048017
Eupl12g00966 1115 PIRSF PLD_euk 604 1115 IPR016555 GO:0004630|GO:0006654|GO:0048017
Eupl12g00966 1115 PANTHER PHOSPHOLIPASE D 157 1104 IPR015679 -
Eupl12g00966 1115 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 911 938 IPR001736 GO:0003824
Eupl12g00966 1115 Gene3D Endonuclease Chain A 732 970 - -
Eupl12g00966 1115 Gene3D - 238 340 IPR011993 -
Eupl12g00966 1115 SMART pld_4 477 504 IPR001736 GO:0003824
Eupl12g00966 1115 SMART pld_4 911 938 IPR001736 GO:0003824
Eupl12g00966 1115 Coils Coil 609 629 - -
Eupl12g00966 1115 SMART PH_update 216 344 IPR001849 -
Eupl12g00966 1115 SUPERFAMILY Phospholipase D/nuclease 327 597 - -
Eupl12g00966 1115 MobiDBLite consensus disorder prediction 610 631 - -
Eupl12g00966 1115 CDD PH_PLD 193 340 - -
Eupl12g00966 1115 Gene3D Endonuclease Chain A 362 616 - -
Eupl12g00966 1115 MobiDBLite consensus disorder prediction 609 635 - -
Eupl12g00966 1115 Coils Coil 98 118 - -
Eupl12g00966 1115 Pfam PLD-like domain 784 957 IPR025202 -
Eupl12g00966 1115 SUPERFAMILY PH domain-like 246 340 - -
Eupl12g00966 1115 SUPERFAMILY Phospholipase D/nuclease 730 985 - -
Eupl12g00966 1115 ProSiteProfiles PH domain profile. 251 342 IPR001849 -
Eupl12g00966 1115 Pfam Phospholipase D Active site motif 477 504 IPR001736 GO:0003824
Eupl12g00966 1115 CDD PLDc_vPLD1_2_yPLD_like_1 370 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00966 Eupl-Chr12 25752943 25778453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00966 1 994 Phospholipase D Gene Family (Wang group) AT3G16785 74.600 0.0 1427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00966 K01115 - nnu:104598883 1928.68