Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00965 ATGAGACATTTGTCTTCTCTGTTCAATGGACTGGCAAGCTCTCTCTCCCCTAAAAAAGAGAGAAATTGTGGGAATGATGTCGGGAGGGAAGTCTCTGAATCCATGGCAAAAGAAGCGAAGAAGAACGATTTGATATTGCGTTCTTCGGGTATTGTTAGTGCCGACGGTTCGAACAATTTCGCTTCAGTTTTCTCTAAGAGAGGGAAGAAAGGAGAGAATCAGGATCGCTTAATTGTGTGGGAGGAATTTGGGTGCCAAGAAGACATGATCTTTTGTGGGGTGTTTGACGGGCACGGTCCATGGGGGCACTATGTAGCGAAACAGGTCAGGGAATCGATGCCTTCGTCTTTGCTGTGCAATTGGCAGGAGACTCTCTCTCTAACTTCCCTTGACCTGGATTTTGATTCGGAATTGGATAAAAAGCCTCACCGGTTCGATATATGGAAGCAATCCTACTTAAAGACTTGTGCTGCCATTGATCAGGAGCTCGAGCAGCATCGCGTGATCAACTCCTTCGATAGCGGTACCACTGCTTTGACAATTGTGAGACAGGGTGAACTCATCGTTATAGCAAACGTTGGCGACTCTCGTGCTGTGTTGGCTACCACTTCTGATGATGGCACCTTGATTCCTGTTCAGCTTACCATTGATTTCAAGCCAAACTTACCTCAGGAGGCTGATCGGATAATGCAATGCAAAGGGCGGGTGTTCTGTTTACCTGATGAACCAGGTGTGCAAAGGGTCTGGCTACCAGATGGGGAAACACCAGGACTGGCAATGTCAAGATCCTTTGGGGACTACTGTGTGAAGGACTTTGGGATTATTTCTGTGCCTGAAGTCACGCAGAGGAATATAACCAGCAAAGACCAGTTTGTTGTGCTGGCAACAGATGGGGTGTGGGATGTTATCTCCAACCAAGAAGCAGTGCAGATCGTTTCTTCAACATCGGATAGGGGGGAAGCGGCTAAACGGCTGGTGGAGTGTGCAGTTCGTGCATGGAAATGTAAGAGAAGGGGCATTGCAATGGACGACATTTCAGCTATTTGCCTCTTCTTTCACTGTTCACCATCCTCTCAGAAGGTCAACCCCACTTAG 1095 0.4767 MRHLSSLFNGLASSLSPKKERNCGNDVGREVSESMAKEAKKNDLILRSSGIVSADGSNNFASVFSKRGKKGENQDRLIVWEEFGCQEDMIFCGVFDGHGPWGHYVAKQVRESMPSSLLCNWQETLSLTSLDLDFDSELDKKPHRFDIWKQSYLKTCAAIDQELEQHRVINSFDSGTTALTIVRQGELIVIANVGDSRAVLATTSDDGTLIPVQLTIDFKPNLPQEADRIMQCKGRVFCLPDEPGVQRVWLPDGETPGLAMSRSFGDYCVKDFGIISVPEVTQRNITSKDQFVVLATDGVWDVISNQEAVQIVSSTSDRGEAAKRLVECAVRAWKCKRRGIAMDDISAICLFFHCSPSSQKVNPT* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00965 364 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Eupl12g00965 364 Pfam Protein phosphatase 2C 70 330 IPR001932 -
Eupl12g00965 364 Gene3D - 51 354 IPR036457 -
Eupl12g00965 364 PANTHER PROTEIN PHOSPHATASE 43 350 IPR015655 GO:0004722|GO:0006470
Eupl12g00965 364 FunFam Probable protein phosphatase 2C 34 51 354 - -
Eupl12g00965 364 SUPERFAMILY PP2C-like 59 353 IPR036457 -
Eupl12g00965 364 CDD PP2Cc 59 352 IPR001932 -
Eupl12g00965 364 SMART PP2C_4 52 350 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00965 Eupl-Chr12 25742157 25746534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00965 1 353 PP2C-type Phosphatase Gene Family AT3G05640 69.859 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00965 - - ming:122061945 598.586