Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00959 ATGGGAGAACAATCAGATTTCAAGTCACAGTTAGTGACAGAGATATGCTCTCTATCGTCTCGCTCGATTGGATGCGCTCACCGTCGCCTCCATCACCAAATAAAACCGCCATTCATCGACTGGTATCTTCTTCTTCGAGTAGAAGAAGACGCAGAGGTATATAAAATTCGCAAGCAATACCGTAAACTCGCTTTGCAACTTCATCCAGATAAGAACAGACACCCCAAGGCTGAGATTGCATTCAAGCTTGTCTCAGAGGCCTATACATGTCTCTCTGACAAAGGAAAAAGAAGAGCCTTTGATTCCAAAAGATGGAACAATTTCTGCACCGAATGCAACAGAATCCCGTATGAGACCTGCAAGTTTTATCCAGATGAATCAAAATCTAGTAAAATTTTCCAGTGTTTGAGAGAAGTCAGAGACAGATTCAGAGAAGAAACCAGAGTAATAGAGAACTGCTTGAAGGTCCATGAAGGATCCAGAAAAGAATTTCCACTTTTCAATCCATCCAACTATTTGTTTCAAGACTACCCCCATCCCAGAACTCAGATTTACAGGAAACCTGATGGCTTCCGTTATTTGCGAAGAGGAAATATCCCAGAGTATGATCACAGAAGTGGAAAGTGCGACTCCCCAATCTTCACAATTGGATCGGAGAGGAGATCGTTCAGAAACAAATCTGCCTGTCTAAGTTCGTAA 699 0.4235 MGEQSDFKSQLVTEICSLSSRSIGCAHRRLHHQIKPPFIDWYLLLRVEEDAEVYKIRKQYRKLALQLHPDKNRHPKAEIAFKLVSEAYTCLSDKGKRRAFDSKRWNNFCTECNRIPYETCKFYPDESKSSKIFQCLREVRDRFREETRVIENCLKVHEGSRKEFPLFNPSNYLFQDYPHPRTQIYRKPDGFRYLRRGNIPEYDHRSGKCDSPIFTIGSERRSFRNKSACLSS* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00959 232 SUPERFAMILY Chaperone J-domain 30 106 IPR036869 -
Eupl12g00959 232 Gene3D DnaJ domain 39 148 IPR036869 -
Eupl12g00959 232 PRINTS DnaJ domain signature 42 60 IPR001623 -
Eupl12g00959 232 PRINTS DnaJ domain signature 60 75 IPR001623 -
Eupl12g00959 232 PRINTS DnaJ domain signature 76 96 IPR001623 -
Eupl12g00959 232 CDD DnaJ 40 93 IPR001623 -
Eupl12g00959 232 ProSiteProfiles dnaJ domain profile. 40 104 IPR001623 -
Eupl12g00959 232 Pfam DnaJ domain 40 101 IPR001623 -
Eupl12g00959 232 PANTHER BNAC03G44070D PROTEIN 26 123 - -
Eupl12g00959 232 SMART dnaj_3 39 96 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00959 Eupl-Chr12 25675449 25677010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00959 40 102 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 46.269 1.34e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00959 - - ming:122093912 277.715