Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00949 ATGCCTTGTCAATCTCATGCTCATAGTACGAAGGGCCTTCTCTGCAATGCCGGCGCTGGCGCAGCTGCCGGAGTTATCGCTGCAACATTTGTTTGCCCTTTGGATGTCATCAAGACAAGGTTTCAGGTCCACGGGCTACCCATGCTCGGTAATGGAAATATTAAAGGTAGCCTCATAGTTGGGAGTTTGGAACAAATATTTCAAAAGGAGGGGATGCGTGGCATGTACCGTGGGCTTTCTCCCACTGTATTGGCATTACTTCCGAACTGGGCTGTTTATTTCACAATTTATGAGCAGCTCAAAAGCTTACTTTATTCCAGTGATGGGAGCCATCAACTCTCAATAGGTGCAAATATGATAGCTGCTGCTGGTGCTGGAGCTGCAACTTCGATTGCCACCAATCCTCTTTGGGTTGTCAAGACAAGATTTCAAACTCAAGGTATGAGGGCTGGAGTGGTGCCATATAGGAGTACACTGTCTTCTTTGAGGAGAATAGCCCACGAAGAGGGTATTCGTGGATTATACAGTGGTCTTGTGCCTGCATTGGCAGGAATCAGCCACGTTGCCATTCAGTTCCCGATGTATGAGAAGATCAAAATCTACCTGGCCAAATGA 615 0.4715 MPCQSHAHSTKGLLCNAGAGAAAGVIAATFVCPLDVIKTRFQVHGLPMLGNGNIKGSLIVGSLEQIFQKEGMRGMYRGLSPTVLALLPNWAVYFTIYEQLKSLLYSSDGSHQLSIGANMIAAAGAGAATSIATNPLWVVKTRFQTQGMRAGVVPYRSTLSSLRRIAHEEGIRGLYSGLVPALAGISHVAIQFPMYEKIKIYLAK* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00949 204 SUPERFAMILY Mitochondrial carrier 12 202 IPR023395 -
Eupl12g00949 204 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Eupl12g00949 204 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 14 203 IPR044712 GO:0006862|GO:0055085
Eupl12g00949 204 Gene3D Mitochondrial carrier domain 13 204 IPR023395 -
Eupl12g00949 204 Pfam Mitochondrial carrier protein 112 203 IPR018108 -
Eupl12g00949 204 Pfam Mitochondrial carrier protein 12 106 IPR018108 -
Eupl12g00949 204 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 103 IPR018108 -
Eupl12g00949 204 PRINTS Mitochondrial carrier protein signature 26 44 IPR002067 GO:0055085
Eupl12g00949 204 PRINTS Mitochondrial carrier protein signature 76 94 IPR002067 GO:0055085
Eupl12g00949 204 PRINTS Mitochondrial carrier protein signature 122 144 IPR002067 GO:0055085
Eupl12g00949 204 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 2 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00949 Eupl-Chr12 25583295 25588279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00949 1 204 Chloroplast and Mitochondria Gene Families AT2G47490 78.922 9.00e-105 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00949 K15115 - msin:131225296 350.903