Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00937 ATGTTCTTACAAGACATGGAAGATCAGCTTCACCATACTACTGTTCTTCCTAAAGTAAGTGATCAGTTCCACTTCAGTTCCTGCTATTTGCAAGATGGGCAAGCTCGGAACAGCGGCTTCTATAAGCCTGATATTTATCAGAGGTGTTTAAACAATGGGAATTATAGAAATGGGGGTCTGCAGAGTTACTTGATGCCGACGTGCCAAGGGATCCGTGATCATTCTATGTTCATTTCAGTGTCACCTGTTCTTGTACAAGCACCTTCAGAGAAAGGTTTTGGTGGTTTCATGATTGACTTCTTGATGGGTGGAGTCTCTGCAGCTGTATCGAAAACTGCTGCTGCTCCTATTGAACGTGTGAAGCTTTTGATCCAGAACCAGGATGAGATGATCAAGGCTGGTAGGCTATCTGAACCCTACAAGGGAATTGGAGATTGTTTTGGTCGAACAATTAAGGATGAAGGGATTGTTGCATTATGGAGAGGGAACACCGCAAACGTCATCCGTTACTTCCCTACTCAGGCCTTAAACTTTGCATTCAAGGATTACTTCAAGCGTCTGTTTAACTTCAAGAAGGACAGAGATGGCTACTGGAAATGGTTTGCAGGCAATTTAGCATCAGGAGGTGCAGCTGGTGCTTCTTCCCTCCTCTTTGTCTACTCCCTAGACTATGCTCGAACCCGTCTGGCTAACGATGCGAAGGCAGCAAAGAAGGGAGGAGAGAGGCAGTTTAATGGCTTGATTGATGTGTACAGGAAAACAATGAAATCGGATGGCGTTGCTGGACTCTACCGTGGATTCAACATTTCCTGTGTTGGAATCATAGTATATCGGGGTCTCTATTTTGGAATGTATGACTCTCTCAAACCTGTGCTTCTGGTCGGAAATCTGCAGGATAGTTTCTTTGCGAGTTTCGCTCTTGGTTGGGTGATCACGAATGGAGCTGGCCTTGCATCCTACCCAATCGACACTGTTCGTAGAAGAATGATGATGACTTCTGGTGAAGCTGTCAAGTACAAGAGCTCTATGGATGCATTCTCCCAGATACTGAAGAATGAGGGGACCAAATCATTGTTCAAGGGTGCTGGAGCAAACATACTACGTGCAGTTGCAGGAGCAGGTGTGCTTGCAGGGTATGACAAGTTACAGATGATCGTGCTTGGGAAGAAGTATGGATCTGGTAGCGGCTAA 1191 0.4551 MFLQDMEDQLHHTTVLPKVSDQFHFSSCYLQDGQARNSGFYKPDIYQRCLNNGNYRNGGLQSYLMPTCQGIRDHSMFISVSPVLVQAPSEKGFGGFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYRKTMKSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLVGNLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQMIVLGKKYGSGSG* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00937 396 Pfam Mitochondrial carrier protein 96 191 IPR018108 -
Eupl12g00937 396 Pfam Mitochondrial carrier protein 198 292 IPR018108 -
Eupl12g00937 396 Pfam Mitochondrial carrier protein 300 385 IPR018108 -
Eupl12g00937 396 FunFam ADP,ATP carrier protein, mitochondrial 97 392 - -
Eupl12g00937 396 PRINTS Mitochondrial carrier protein signature 214 232 IPR002067 GO:0055085
Eupl12g00937 396 PRINTS Mitochondrial carrier protein signature 99 112 IPR002067 GO:0055085
Eupl12g00937 396 PRINTS Mitochondrial carrier protein signature 112 126 IPR002067 GO:0055085
Eupl12g00937 396 PRINTS Mitochondrial carrier protein signature 162 182 IPR002067 GO:0055085
Eupl12g00937 396 PRINTS Mitochondrial carrier protein signature 308 330 IPR002067 GO:0055085
Eupl12g00937 396 PRINTS Mitochondrial carrier protein signature 264 282 IPR002067 GO:0055085
Eupl12g00937 396 SUPERFAMILY Mitochondrial carrier 95 381 IPR023395 -
Eupl12g00937 396 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 83 396 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Eupl12g00937 396 Gene3D Mitochondrial carrier domain 97 392 IPR023395 -
Eupl12g00937 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 199 291 IPR018108 -
Eupl12g00937 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 94 187 IPR018108 -
Eupl12g00937 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 299 385 IPR018108 -
Eupl12g00937 396 PRINTS Adenine nucleotide translocator signature 140 161 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Eupl12g00937 396 PRINTS Adenine nucleotide translocator signature 199 212 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Eupl12g00937 396 PRINTS Adenine nucleotide translocator signature 173 185 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Eupl12g00937 396 PRINTS Adenine nucleotide translocator signature 96 108 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Eupl12g00937 396 PRINTS Adenine nucleotide translocator signature 304 320 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00937 Eupl-Chr12 25443076 25447672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00937 6 394 Antiporters AT5G13490 78.718 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00937 K05863 - msin:131222505 642.884