Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00934 ATGGATTCTGATTCTCTGAGTCCCTTTCATGCCGTCACTTTCACGAAAGAAAACCGGGTTCTGAACTTCCTCTGCAACTTCTACCAACCTTCTCTGCAACTTCTACGAACCTTCCGTGCAACTTCTACGAACCTTCCGTGCAACTTCACTCTCAATCGTTCTACTCAGGTGCGAGAGGAGGTGGAACGTGGAATTCTACTGTATATACACTCGTCTCCTAGACCTTCCTTTAATCAGATCGAGGCATCTGTACCAAGAAGCTGGCGTTTGCATTTCAAAAATAAGTTGCCTGGTGAACTTTTCACGGGTAGCAGTATAGAAGGAGAGGGCAATACACCTGTTCAAATAGTTATTCTCGATGGTAATTCTGAAGAGATAATCACAACTGGTCCTCTATCTTCGATCAAGATAGAGATTCTTGTCCTCGATGGTGATTTTGGTCGTGCTGAACAAGAAGATTGGACCAAGAATGAGTTTGATGCTCGTGTGATACGTGAAAGAGAGGGCAAAAGGCCATTGGTGATTGGAGATCTGGTAATTACATTGAGAGATGGTGTTGGTTATCTTGGCAAGATCACTTTTACAGATAATTCCAGCTGGATACGAAGTCGAAGGTTCAGGTTGGGAGCTAGACCTGTGCGAAACACTTGCAATGAAGAAAGAATAAGAGAAGCAAGAAGTGGAGCTTTTATGGTAAAAGATCACCGTGGAGAATTGTATAAGAAGCACCACCCTCCATCCTTTGGTGATGAGATATGGCGTTTGGAGAAGATAGGGAAAGATGGTGCTTTTCATAGCCGACTGGCTTCTAATAGAATTTACACAGTTCAGGACTTCTTGAGGTTGTGCGTCGCTGATCCTTCCTTGCTACGCAGTATACTTGGCAGTGGGATGTCAAAGAAGACATATGATACTATTATTCAACATGCCTCAGCTTGTGTTTTAGACAGTAAGCGGTACATGTACTCCGACACTCGGCAGCGGGTTGGGCTCGTGTTTGATTCCATCTACAGGGTTGTTGGGGCAACATTTGATGGCCATTACCATTTACTGGATAACTTCAATACATTTCAGATGAGTTTGGTGGAGGTTTTGAAGCAGAAAGCTTATAAAAACCTGAATGATATTGTTGAGATTGATGAGCCATCAGTTGATGTCCCTTCAAGGGCCTTGCTTGGGTTAGAATCTCCCCCCTGTCCAGCATCAAGCCTAGATGTGTGGCATTCCAACTTTTCAATCACACCTCAAGATCAACTAGCACCACAACTGGGTTTCAATGCTCCCACCAACTCAACACCAAACGTTTTGGAAGGTCATAGTCAGTTGGAAGATGTTGCTATCATGTATGGTTGTCATCCGATACAACTGTTGTCAACAATCCAAAGGAACAGTTTCAACATGAGGGGTTCTTTCACTGGACCTTCTGCTAATGATGGAAATGAATGCTTCCCAGGTGGATCATTGGGCCCTGCTGTGCTGGGTGCGCATTTGACAGGGAATGACATTTCTCAGGTTCAGATTCCGAGTTGGTTTCCAGTTACAACGATGCGGGAACAAGGGAACGGAATGTTTGTGGCCTCGAACGGTGAAACAGACATTGATTTTCTTTCTTCTATGCCTGATTTAAGTGATCATATTTTTAGGAGTTGTAAACCCAAAATGCAGTGGGTTAAGCTTAAGGCCGCTATTAAATGGGGAATATGTGTTAGGAAGGATGTACTTGGTTATTAG 1731 0.4373 MDSDSLSPFHAVTFTKENRVLNFLCNFYQPSLQLLRTFRATSTNLPCNFTLNRSTQVREEVERGILLYIHSSPRPSFNQIEASVPRSWRLHFKNKLPGELFTGSSIEGEGNTPVQIVILDGNSEEIITTGPLSSIKIEILVLDGDFGRAEQEDWTKNEFDARVIREREGKRPLVIGDLVITLRDGVGYLGKITFTDNSSWIRSRRFRLGARPVRNTCNEERIREARSGAFMVKDHRGELYKKHHPPSFGDEIWRLEKIGKDGAFHSRLASNRIYTVQDFLRLCVADPSLLRSILGSGMSKKTYDTIIQHASACVLDSKRYMYSDTRQRVGLVFDSIYRVVGATFDGHYHLLDNFNTFQMSLVEVLKQKAYKNLNDIVEIDEPSVDVPSRALLGLESPPCPASSLDVWHSNFSITPQDQLAPQLGFNAPTNSTPNVLEGHSQLEDVAIMYGCHPIQLLSTIQRNSFNMRGSFTGPSANDGNECFPGGSLGPAVLGAHLTGNDISQVQIPSWFPVTTMREQGNGMFVASNGETDIDFLSSMPDLSDHIFRSCKPKMQWVKLKAAIKWGICVRKDVLGY* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00934 576 Pfam Calmodulin binding protein-like N-terminal domain 88 235 IPR046831 -
Eupl12g00934 576 Pfam Calmodulin binding protein C-terminal domain 318 379 IPR046829 -
Eupl12g00934 576 PANTHER OS02G0177800 PROTEIN 31 431 IPR012416 GO:0005516
Eupl12g00934 576 Pfam Calmodulin binding protein central domain 249 313 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00934 Eupl-Chr12 25411389 25416961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00934 57 571 Calmodulin-binding Proteins AT5G57580 35.678 1.77e-108 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00934 - - nnu:104605135 645.966