Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00918 ATGGCGTATCGAAGAACGAGATTGTTGTTCCTTCTCTGTCTTCTATCCTACGCGCTCTCCGCCCTTGGAGGGAAAAGCTACTACGATATCCTGCAAGTCTCGAAAGGCTCCTCGGACGAGCAGATCAAACGAGCTTATCGGAAGCTCGCTTTGAAATACCATCCCGATAAGAACCAGGGAAATGAAGAGGCCAATAAGAGATTTGCAGAAATAAACAATGCATATGAAGCGCTATCGGATCGCGAGAAAAGGAATATATACGATAGGCATGGCGAAGAGGGTCTGAAGCAGCATGCCGCCAGTGGGGGCAGGGGTGGAGGGATGAACATCCAAGACATCTTTAGTAACTTCTTTGGTGGAGGTCCAGCGGAAGAGGAAGAAAGGATTGTGAAGGGTGATGATATAATTGTTGAACTGGATGCAACATTGGAAGATTTATACATGGGAGGTTCGTTGAAGGTTTGGAGGGAGAAAAACATATTAAAGCCAGCCCCTGGTAAGAGGCGTTGTAACTGTCGAAATGAGGTTTATCACAAGCAAATTGGTCCTGGAATGTTTCAGCAGATGACAGAGCAGGTCTGTGAGCAATGCCCAAATGTCAAATATGAACGGGAGGGGTATTTTGTCACTGTTGATATTGAGAAAGGGATGCAAGATGGGCAAGAGGTGGTCTTTTATGAGGATGGTGAGCCTGTAATAGATGGAGAAGCTGGAGATCTGAAGTTTCGGATTCGTACAGCACCCCATGATCGCTTCAGAAGGGAAGGCAATGACCTGCACACAACCGTTACAATAACACTGGTCCAAGCTCTTGTTGGTTTCGAAAAGACCATCAAACACCTTGATGAACATTTAGTGGACATCAGCTCAAAGGGAGTTACTAAACCCAAGGAGGTGAGGAAGTTTAAAGGGGAAGGGATGCCTTCGCATTTTAGCTCAAAGAAAGGGGATTTATATGTTACCTTTGAGGTTCTATTCCCTACTTCACTGACAGAAAATCAGAAGACCAAGATCAAGGAGGTTCTCGGTTAG 1032 0.4554 MAYRRTRLLFLLCLLSYALSALGGKSYYDILQVSKGSSDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEALSDREKRNIYDRHGEEGLKQHAASGGRGGGMNIQDIFSNFFGGGPAEEEERIVKGDDIIVELDATLEDLYMGGSLKVWREKNILKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCEQCPNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPVIDGEAGDLKFRIRTAPHDRFRREGNDLHTTVTITLVQALVGFEKTIKHLDEHLVDISSKGVTKPKEVRKFKGEGMPSHFSSKKGDLYVTFEVLFPTSLTENQKTKIKEVLG* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00918 343 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Eupl12g00918 343 CDD DnaJ_C 133 330 - -
Eupl12g00918 343 FunFam DnaJ protein ERDJ3B 23 127 - -
Eupl12g00918 343 Gene3D - 127 248 - -
Eupl12g00918 343 FunFam DnaJ subfamily B member 11 248 343 - -
Eupl12g00918 343 Coils Coil 61 81 - -
Eupl12g00918 343 Gene3D DnaJ domain 24 126 IPR036869 -
Eupl12g00918 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 131 250 IPR008971 GO:0006457|GO:0051082
Eupl12g00918 343 SMART dnaj_3 25 83 IPR001623 -
Eupl12g00918 343 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Eupl12g00918 343 Pfam DnaJ domain 27 88 IPR001623 -
Eupl12g00918 343 CDD DnaJ 27 80 IPR001623 -
Eupl12g00918 343 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 11 7 342 - -
Eupl12g00918 343 PRINTS DnaJ domain signature 46 61 IPR001623 -
Eupl12g00918 343 PRINTS DnaJ domain signature 63 83 IPR001623 -
Eupl12g00918 343 PRINTS DnaJ domain signature 28 46 IPR001623 -
Eupl12g00918 343 PRINTS DnaJ domain signature 83 102 IPR001623 -
Eupl12g00918 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 251 336 IPR008971 GO:0006457|GO:0051082
Eupl12g00918 343 Gene3D - 249 327 - -
Eupl12g00918 343 Pfam DnaJ C terminal domain 136 327 IPR002939 -
Eupl12g00918 343 SUPERFAMILY Chaperone J-domain 23 121 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00918 Eupl-Chr12 25192529 25202056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00918 25 117 C2H2 Transcription Factor Family AT1G74250 38.384 7.47e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00918 K09517 - nnu:104605116 630.557