Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00917 ATGTCTCAGTCCAATAGTAATGCGGTTGGAATTGACAATACTTTTAGAAGAAAATTCAATCGAGAAGAATATTTGGAACGAGCTCGTGAGCGGGAGGAACAGGAGGAGGAGGGGCGGTTTAAATCTAAGTCAAAAGGTCCTCCGGTGCAAAGGAAACCCTTGAAGCACAGGGATTATGAAGTAGACCTTAACTCTCGCTTAGGGAAAACTCAGGTTGTTACTCCAATAGCACCTCTAAGCCAGCAGGCTGGGTACTACTGTTCAGTTTGTGAATGTGTTGTAAAGGATTCTGCAAACTACTTGGACCATATCAATGGGAAGAAACATCAAAGAGCTTTGGGTATGTCAATGCGGGTAGAGCGGGCATCTCTTCAGCAGGTCCAAGATCGATTCGAAGTTCTCAAGAAGCAGAAAGTAGCGGGCAGCTTTACAGAGCAAGATCTAGATGAACGGATCCTAAAACAGCAACAAGAAGAGGAAGAACGGAAGCGCCAGCGCCGAGAGAGGAAGAAAGAGAAGAAGAAAGAGAAGGCTGCAGAGGAAGAGCCTCTAGAGGGGGACGCCGATGTTGCGGCAATGATGGGATTTGGAGGTTTTGGTTCGTCCAAAAAGTGA 615 0.465 MSQSNSNAVGIDNTFRRKFNREEYLERAREREEQEEEGRFKSKSKGPPVQRKPLKHRDYEVDLNSRLGKTQVVTPIAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLQQVQDRFEVLKKQKVAGSFTEQDLDERILKQQQEEEERKRQRRERKKEKKKEKAAEEEPLEGDADVAAMMGFGGFGSSKK* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00917 204 MobiDBLite consensus disorder prediction 145 204 - -
Eupl12g00917 204 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 10 204 IPR040107 GO:0000398|GO:0005681
Eupl12g00917 204 FunFam zinc finger matrin-type protein 2-like 79 117 - -
Eupl12g00917 204 MobiDBLite consensus disorder prediction 22 44 - -
Eupl12g00917 204 Pfam Zinc-finger of C2H2 type 85 109 - -
Eupl12g00917 204 MobiDBLite consensus disorder prediction 22 55 - -
Eupl12g00917 204 Coils Coil 150 182 - -
Eupl12g00917 204 SMART ZnF_U1_5 82 116 IPR003604 GO:0003676|GO:0008270
Eupl12g00917 204 SUPERFAMILY beta-beta-alpha zinc fingers 81 122 IPR036236 -
Eupl12g00917 204 Gene3D Classic Zinc Finger 80 117 - -
Eupl12g00917 204 MobiDBLite consensus disorder prediction 145 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00917 Eupl-Chr12 25185107 25190220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00917 1 147 C2H2 Transcription Factor Family AT3G05760 76.871 4.07e-82 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl12g00917 zf-C2H2_jaz 1.9e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00917 K12848 - ming:122090666 265.774